Protein–RNA interactions for Protein: P52951

GBX2, Homeobox protein GBX-2, humanhuman

Predicted RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GBX2P52951 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GBX2P52951 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.77■□□□□ 0.44
GBX2P52951 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GBX2P52951 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.77■□□□□ 0.44
GBX2P52951 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GBX2P52951 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
GBX2P52951 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.77■□□□□ 0.43
GBX2P52951 AC005332.7-201ENST00000614046 2005 ntBASIC17.77■□□□□ 0.43
GBX2P52951 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.77■□□□□ 0.43
GBX2P52951 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
GBX2P52951 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GBX2P52951 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
GBX2P52951 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GBX2P52951 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GBX2P52951 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GBX2P52951 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.76■□□□□ 0.43
GBX2P52951 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GBX2P52951 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GBX2P52951 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.76■□□□□ 0.43
GBX2P52951 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.76■□□□□ 0.43
GBX2P52951 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.76■□□□□ 0.43
GBX2P52951 MIR6084-201ENST00000622012 110 ntBASIC17.76■□□□□ 0.43
GBX2P52951 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.76■□□□□ 0.43
GBX2P52951 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
GBX2P52951 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
GBX2P52951 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
GBX2P52951 AP000974.1-201ENST00000623909 2387 ntBASIC17.76■□□□□ 0.43
GBX2P52951 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
GBX2P52951 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
GBX2P52951 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GBX2P52951 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GBX2P52951 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GBX2P52951 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GBX2P52951 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
GBX2P52951 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
GBX2P52951 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
GBX2P52951 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GBX2P52951 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.75■□□□□ 0.43
GBX2P52951 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.75■□□□□ 0.43
GBX2P52951 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.75■□□□□ 0.43
GBX2P52951 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
GBX2P52951 IRS3P-201ENST00000223076 1006 ntBASIC17.75■□□□□ 0.43
GBX2P52951 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.75■□□□□ 0.43
GBX2P52951 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.75■□□□□ 0.43
GBX2P52951 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GBX2P52951 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GBX2P52951 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
GBX2P52951 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
GBX2P52951 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.75■□□□□ 0.43
GBX2P52951 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GBX2P52951 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.74■□□□□ 0.43
GBX2P52951 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GBX2P52951 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
GBX2P52951 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
GBX2P52951 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GBX2P52951 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GBX2P52951 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.74■□□□□ 0.43
GBX2P52951 AC105265.2-201ENST00000467189 838 ntBASIC17.74■□□□□ 0.43
GBX2P52951 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.74■□□□□ 0.43
GBX2P52951 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.74■□□□□ 0.43
GBX2P52951 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
GBX2P52951 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
GBX2P52951 AP001160.3-201ENST00000601484 763 ntBASIC17.74■□□□□ 0.43
GBX2P52951 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
GBX2P52951 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
GBX2P52951 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GBX2P52951 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.74■□□□□ 0.43
GBX2P52951 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
GBX2P52951 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GBX2P52951 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GBX2P52951 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GBX2P52951 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
GBX2P52951 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.73■□□□□ 0.43
GBX2P52951 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
GBX2P52951 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GBX2P52951 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GBX2P52951 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
GBX2P52951 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
GBX2P52951 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
GBX2P52951 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
GBX2P52951 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GBX2P52951 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
GBX2P52951 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
GBX2P52951 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
GBX2P52951 AC091799.1-201ENST00000422823 811 ntBASIC17.73■□□□□ 0.43
GBX2P52951 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.73■□□□□ 0.43
GBX2P52951 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.73■□□□□ 0.43
GBX2P52951 KRT18P20-201ENST00000548986 1279 ntBASIC17.73■□□□□ 0.43
GBX2P52951 CCDC92B-201ENST00000575506 885 ntBASIC17.73■□□□□ 0.43
GBX2P52951 AC104187.1-201ENST00000607510 612 ntBASIC17.73■□□□□ 0.43
GBX2P52951 AC243732.1-201ENST00000612648 864 ntBASIC17.73■□□□□ 0.43
GBX2P52951 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.73■□□□□ 0.43
GBX2P52951 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
GBX2P52951 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GBX2P52951 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GBX2P52951 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
GBX2P52951 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GBX2P52951 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.73■□□□□ 0.43
GBX2P52951 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
GBX2P52951 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms