Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.42■□□□□ 0.7
PDX1P52945 PRKY-204ENST00000533551 1019 ntBASIC19.42■□□□□ 0.7
PDX1P52945 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.42■□□□□ 0.7
PDX1P52945 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDX1P52945 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.42■□□□□ 0.7
PDX1P52945 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
PDX1P52945 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PDX1P52945 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDX1P52945 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDX1P52945 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDX1P52945 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDX1P52945 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDX1P52945 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PDX1P52945 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.41■□□□□ 0.7
PDX1P52945 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PDX1P52945 AC087499.1-201ENST00000418141 1075 ntBASIC19.41■□□□□ 0.7
PDX1P52945 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.41■□□□□ 0.7
PDX1P52945 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDX1P52945 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDX1P52945 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.41■□□□□ 0.7
PDX1P52945 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.41■□□□□ 0.7
PDX1P52945 AL355075.4-201ENST00000554988 638 ntBASIC19.41■□□□□ 0.7
PDX1P52945 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.41■□□□□ 0.7
PDX1P52945 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.41■□□□□ 0.7
PDX1P52945 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDX1P52945 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDX1P52945 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDX1P52945 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDX1P52945 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.41■□□□□ 0.7
PDX1P52945 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDX1P52945 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PDX1P52945 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PDX1P52945 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDX1P52945 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.4■□□□□ 0.7
PDX1P52945 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDX1P52945 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PDX1P52945 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDX1P52945 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PDX1P52945 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.4■□□□□ 0.7
PDX1P52945 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PDX1P52945 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.4■□□□□ 0.7
PDX1P52945 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDX1P52945 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDX1P52945 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.4■□□□□ 0.7
PDX1P52945 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.4■□□□□ 0.7
PDX1P52945 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.4■□□□□ 0.7
PDX1P52945 AC010331.1-201ENST00000611423 582 ntBASIC19.4■□□□□ 0.7
PDX1P52945 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.4■□□□□ 0.7
PDX1P52945 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.4■□□□□ 0.7
PDX1P52945 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDX1P52945 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDX1P52945 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.4■□□□□ 0.7
PDX1P52945 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.4■□□□□ 0.7
PDX1P52945 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDX1P52945 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.4■□□□□ 0.7
PDX1P52945 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PDX1P52945 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDX1P52945 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDX1P52945 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.39■□□□□ 0.69
PDX1P52945 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDX1P52945 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDX1P52945 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDX1P52945 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDX1P52945 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.39■□□□□ 0.69
PDX1P52945 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.39■□□□□ 0.69
PDX1P52945 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDX1P52945 KRT18P21-201ENST00000515767 1272 ntBASIC19.39■□□□□ 0.69
PDX1P52945 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PDX1P52945 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.39■□□□□ 0.69
PDX1P52945 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDX1P52945 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.39■□□□□ 0.69
PDX1P52945 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDX1P52945 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.39■□□□□ 0.69
PDX1P52945 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.39■□□□□ 0.69
PDX1P52945 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDX1P52945 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDX1P52945 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDX1P52945 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDX1P52945 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDX1P52945 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
PDX1P52945 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDX1P52945 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDX1P52945 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDX1P52945 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.38■□□□□ 0.69
PDX1P52945 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.38■□□□□ 0.69
PDX1P52945 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.38■□□□□ 0.69
PDX1P52945 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.38■□□□□ 0.69
PDX1P52945 AC012306.2-201ENST00000609350 630 ntBASIC19.38■□□□□ 0.69
PDX1P52945 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.38■□□□□ 0.69
PDX1P52945 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.38■□□□□ 0.69
PDX1P52945 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
PDX1P52945 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDX1P52945 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.37■□□□□ 0.69
PDX1P52945 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDX1P52945 AC011484.1-201ENST00000377652 1995 ntBASIC19.37■□□□□ 0.69
PDX1P52945 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PDX1P52945 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.37■□□□□ 0.69
PDX1P52945 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDX1P52945 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDX1P52945 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms