Protein–RNA interactions for Protein: P50079

HSV2, SVP1-like protein 2, yeastyeast

Predicted RBP Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HSV2P50079 YKL100W-AYKL100W-A 90 nt1.57□□□□□ -2.16
HSV2P50079 snR39BsnR39B 96 nt1.56□□□□□ -2.16
HSV2P50079 BRR2YER172C 6492 nt1.56□□□□□ -2.16
HSV2P50079 YNL067W-BYNL067W-B 141 nt1.55□□□□□ -2.16
HSV2P50079 RTP1YMR185W 2946 nt1.55□□□□□ -2.16
HSV2P50079 TAH1YCR060W 336 nt1.54□□□□□ -2.16
HSV2P50079 HUG1YML058W-A 207 nt1.54□□□□□ -2.16
HSV2P50079 YMR326CYMR326C 309 nt1.54□□□□□ -2.16
HSV2P50079 SOM1YEL059C-A 225 nt1.53□□□□□ -2.16
HSV2P50079 RPL26BYGR034W 384 nt1.53□□□□□ -2.16
HSV2P50079 QCR9YGR183C 201 nt1.53□□□□□ -2.16
HSV2P50079 YLR041WYLR041W 321 nt1.53□□□□□ -2.16
HSV2P50079 ASE1YOR058C 2658 nt1.53□□□□□ -2.16
HSV2P50079 YHR131W-AYHR131W-A 246 nt1.52□□□□□ -2.17
HSV2P50079 YML002WYML002W 2214 nt1.52□□□□□ -2.17
HSV2P50079 STF2YGR008C 255 nt1.51□□□□□ -2.17
HSV2P50079 SPC110YDR356W 2835 nt1.5□□□□□ -2.17
HSV2P50079 CDC39YCR093W 6327 nt1.5□□□□□ -2.17
HSV2P50079 GEA2YEL022W 4380 nt1.49□□□□□ -2.17
HSV2P50079 KAP120YPL125W 3099 nt1.49□□□□□ -2.17
HSV2P50079 FYV10YIL097W 1551 nt1.48□□□□□ -2.17
HSV2P50079 SEC21YNL287W 2808 nt1.48□□□□□ -2.17
HSV2P50079 snR61snR61 90 nt1.48□□□□□ -2.17
HSV2P50079 YHR217CYHR217C 462 nt1.48□□□□□ -2.17
HSV2P50079 snR190snR190 190 nt1.47□□□□□ -2.17
HSV2P50079 COG6YNL041C 2520 nt1.46□□□□□ -2.18
HSV2P50079 RCO1YMR075W 2055 nt1.43□□□□□ -2.18
HSV2P50079 SSK2YNR031C 4740 nt1.43□□□□□ -2.18
HSV2P50079 YLR232WYLR232W 348 nt1.42□□□□□ -2.18
HSV2P50079 MEC1YBR136W 7107 nt1.42□□□□□ -2.18
HSV2P50079 SEC8YPR055W 3198 nt1.42□□□□□ -2.18
HSV2P50079 YDR210WYDR210W 228 nt1.41□□□□□ -2.18
HSV2P50079 PRP16YKR086W 3216 nt1.41□□□□□ -2.18
HSV2P50079 IRA1YBR140C 9279 nt1.4□□□□□ -2.19
HSV2P50079 tM(CAU)Q2tM(CAU)Q2 78 nt1.39□□□□□ -2.19
HSV2P50079 YGR130CYGR130C 2451 nt1.38□□□□□ -2.19
HSV2P50079 SBH1YER087C-B 249 nt1.37□□□□□ -2.19
HSV2P50079 YGL041C-BYGL041C-B 183 nt1.37□□□□□ -2.19
HSV2P50079 RPM2YML091C 3609 nt1.37□□□□□ -2.19
HSV2P50079 RAD9YDR217C 3930 nt1.36□□□□□ -2.19
HSV2P50079 CCH1YGR217W 6120 nt1.36□□□□□ -2.19
HSV2P50079 YLR399W-AYLR399W-A 105 nt1.36□□□□□ -2.19
HSV2P50079 YNL284C-BYNL284C-B 5268 nt1.36□□□□□ -2.19
HSV2P50079 HKR1YDR420W 5409 nt1.35□□□□□ -2.19
HSV2P50079 CAT8YMR280C 4302 nt1.34□□□□□ -2.19
HSV2P50079 SEC1YDR164C 2175 nt1.34□□□□□ -2.2
HSV2P50079 tN(GUU)QtN(GUU)Q 71 nt1.33□□□□□ -2.2
HSV2P50079 YPR160W-AYPR160W-A 81 nt1.33□□□□□ -2.2
HSV2P50079 YJL127W-AYJL127W-A 117 nt1.32□□□□□ -2.2
HSV2P50079 MSH3YCR092C 3057 nt1.31□□□□□ -2.2
HSV2P50079 YDL247W-AYDL247W-A 75 nt1.31□□□□□ -2.2
HSV2P50079 YDL073WYDL073W 2955 nt1.31□□□□□ -2.2
HSV2P50079 BIR1YJR089W 2865 nt1.29□□□□□ -2.2
HSV2P50079 PIK1YNL267W 3201 nt1.29□□□□□ -2.2
HSV2P50079 YGR146C-AYGR146C-A 162 nt1.29□□□□□ -2.2
HSV2P50079 PET127YOR017W 2403 nt1.28□□□□□ -2.2
HSV2P50079 NST1YNL091W 3723 nt1.28□□□□□ -2.21
HSV2P50079 tQ(UUG)E2tQ(UUG)E2 72 nt1.26□□□□□ -2.21
HSV2P50079 FYV8YGR196C 2454 nt1.26□□□□□ -2.21
HSV2P50079 PAU12YGR294W 363 nt1.25□□□□□ -2.21
HSV2P50079 PAU24YBR301W 363 nt1.25□□□□□ -2.21
HSV2P50079 tH(GUG)E1tH(GUG)E1 72 nt1.24□□□□□ -2.21
HSV2P50079 tH(GUG)E2tH(GUG)E2 72 nt1.24□□□□□ -2.21
HSV2P50079 tH(GUG)G1tH(GUG)G1 72 nt1.24□□□□□ -2.21
HSV2P50079 tH(GUG)G2tH(GUG)G2 72 nt1.24□□□□□ -2.21
HSV2P50079 tH(GUG)HtH(GUG)H 72 nt1.24□□□□□ -2.21
HSV2P50079 tH(GUG)KtH(GUG)K 72 nt1.24□□□□□ -2.21
HSV2P50079 tH(GUG)MtH(GUG)M 72 nt1.24□□□□□ -2.21
HSV2P50079 YNL266WYNL266W 420 nt1.24□□□□□ -2.21
HSV2P50079 snR81snR81 201 nt1.23□□□□□ -2.21
HSV2P50079 YSP1YHR155W 3687 nt1.22□□□□□ -2.21
HSV2P50079 YBR072C-AYBR072C-A 162 nt1.22□□□□□ -2.21
HSV2P50079 tS(GCU)Q1tS(GCU)Q1 86 nt1.21□□□□□ -2.22
HSV2P50079 SPT7YBR081C 3999 nt1.2□□□□□ -2.22
HSV2P50079 SCC2YDR180W 4482 nt1.19□□□□□ -2.22
HSV2P50079 BEM3YPL115C 3387 nt1.19□□□□□ -2.22
HSV2P50079 NNF2YGR089W 2811 nt1.19□□□□□ -2.22
HSV2P50079 YJR029WYJR029W 5268 nt1.19□□□□□ -2.22
HSV2P50079 YPR137C-BYPR137C-B 5268 nt1.19□□□□□ -2.22
HSV2P50079 UBP3YER151C 2739 nt1.18□□□□□ -2.22
HSV2P50079 IML1YJR138W 4755 nt1.18□□□□□ -2.22
HSV2P50079 LAA1YJL207C 6045 nt1.18□□□□□ -2.22
HSV2P50079 tV(UAC)BtV(UAC)B 74 nt1.17□□□□□ -2.22
HSV2P50079 tV(UAC)DtV(UAC)D 74 nt1.17□□□□□ -2.22
HSV2P50079 YAL037C-AYAL037C-A 93 nt1.15□□□□□ -2.23
HSV2P50079 YIL142C-AYIL142C-A 333 nt1.14□□□□□ -2.23
HSV2P50079 BUD3YCL014W 4911 nt1.13□□□□□ -2.23
HSV2P50079 LTE1YAL024C 4308 nt1.13□□□□□ -2.23
HSV2P50079 GLG1YKR058W 1851 nt1.12□□□□□ -2.23
HSV2P50079 ULP2YIL031W 3105 nt1.12□□□□□ -2.23
HSV2P50079 MYO1YHR023W 5787 nt1.11□□□□□ -2.23
HSV2P50079 RKR1YMR247C 4689 nt1.09□□□□□ -2.23
HSV2P50079 YOL083C-AYOL083C-A 141 nt1.09□□□□□ -2.23
HSV2P50079 SEC10YLR166C 2616 nt1.09□□□□□ -2.24
HSV2P50079 YPR117WYPR117W 7470 nt1.08□□□□□ -2.24
HSV2P50079 YBL071C-BYBL071C-B 99 nt1.08□□□□□ -2.24
HSV2P50079 YLL066W-BYLL066W-B 171 nt1.07□□□□□ -2.24
HSV2P50079 YPL060C-AYPL060C-A 3315 nt1.07□□□□□ -2.24
HSV2P50079 SIP4YJL089W 2490 nt1.06□□□□□ -2.24
HSV2P50079 YBR196C-AYBR196C-A 150 nt1.06□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 27.7 ms