Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CX3CR1P49238 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CX3CR1P49238 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CX3CR1P49238 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CX3CR1P49238 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CX3CR1P49238 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.53■□□□□ 0.4
CX3CR1P49238 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CX3CR1P49238 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.53■□□□□ 0.4
CX3CR1P49238 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CX3CR1P49238 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CX3CR1P49238 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CX3CR1P49238 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CX3CR1P49238 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CX3CR1P49238 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CX3CR1P49238 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CX3CR1P49238 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CX3CR1P49238 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.53■□□□□ 0.4
CX3CR1P49238 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
CX3CR1P49238 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CX3CR1P49238 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.53■□□□□ 0.4
CX3CR1P49238 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CX3CR1P49238 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CX3CR1P49238 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.53■□□□□ 0.4
CX3CR1P49238 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CX3CR1P49238 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.53■□□□□ 0.4
CX3CR1P49238 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CX3CR1P49238 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CX3CR1P49238 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.52■□□□□ 0.4
CX3CR1P49238 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.52■□□□□ 0.4
CX3CR1P49238 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.52■□□□□ 0.4
CX3CR1P49238 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.52■□□□□ 0.4
CX3CR1P49238 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
CX3CR1P49238 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CX3CR1P49238 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.52■□□□□ 0.4
CX3CR1P49238 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
CX3CR1P49238 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CX3CR1P49238 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CX3CR1P49238 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CX3CR1P49238 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CX3CR1P49238 AC007322.1-201ENST00000426983 750 ntBASIC17.52■□□□□ 0.4
CX3CR1P49238 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CX3CR1P49238 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
CX3CR1P49238 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CX3CR1P49238 AC105020.6-201ENST00000621523 1217 ntBASIC17.52■□□□□ 0.4
CX3CR1P49238 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CX3CR1P49238 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CX3CR1P49238 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CX3CR1P49238 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CX3CR1P49238 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CX3CR1P49238 AL691432.2-201ENST00000607222 2038 ntBASIC17.52■□□□□ 0.39
CX3CR1P49238 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.52■□□□□ 0.39
CX3CR1P49238 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
CX3CR1P49238 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CX3CR1P49238 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.52■□□□□ 0.39
CX3CR1P49238 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CX3CR1P49238 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.51■□□□□ 0.39
CX3CR1P49238 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
CX3CR1P49238 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CX3CR1P49238 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.51■□□□□ 0.39
CX3CR1P49238 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CX3CR1P49238 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CX3CR1P49238 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.51■□□□□ 0.39
CX3CR1P49238 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.51■□□□□ 0.39
CX3CR1P49238 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.51■□□□□ 0.39
CX3CR1P49238 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.51■□□□□ 0.39
CX3CR1P49238 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CX3CR1P49238 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.51■□□□□ 0.39
CX3CR1P49238 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CX3CR1P49238 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.51■□□□□ 0.39
CX3CR1P49238 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.51■□□□□ 0.39
CX3CR1P49238 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CX3CR1P49238 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CX3CR1P49238 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.51■□□□□ 0.39
CX3CR1P49238 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CX3CR1P49238 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CX3CR1P49238 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.51■□□□□ 0.39
CX3CR1P49238 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CX3CR1P49238 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CX3CR1P49238 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CX3CR1P49238 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CX3CR1P49238 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CX3CR1P49238 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CX3CR1P49238 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CX3CR1P49238 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CX3CR1P49238 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CX3CR1P49238 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CX3CR1P49238 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CX3CR1P49238 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.5■□□□□ 0.39
CX3CR1P49238 KRT18P68-201ENST00000392293 1000 ntBASIC17.5■□□□□ 0.39
CX3CR1P49238 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.5■□□□□ 0.39
CX3CR1P49238 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CX3CR1P49238 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.5■□□□□ 0.39
CX3CR1P49238 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.5■□□□□ 0.39
CX3CR1P49238 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.5■□□□□ 0.39
CX3CR1P49238 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.5■□□□□ 0.39
CX3CR1P49238 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.5■□□□□ 0.39
CX3CR1P49238 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CX3CR1P49238 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CX3CR1P49238 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CX3CR1P49238 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms