Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
SLC1A6P48664 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SLC1A6P48664 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SLC1A6P48664 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC1A6P48664 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC1A6P48664 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SLC1A6P48664 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC1A6P48664 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC1A6P48664 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC1A6P48664 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC1A6P48664 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC1A6P48664 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC1A6P48664 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC1A6P48664 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC1A6P48664 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC1A6P48664 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC1A6P48664 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC1A6P48664 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC1A6P48664 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC1A6P48664 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC1A6P48664 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC1A6P48664 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC1A6P48664 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SLC1A6P48664 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC1A6P48664 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC1A6P48664 AC027612.3-201ENST00000413684 1047 ntBASIC19.62■□□□□ 0.73
SLC1A6P48664 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC1A6P48664 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC1A6P48664 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC1A6P48664 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.62■□□□□ 0.73
SLC1A6P48664 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SLC1A6P48664 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC1A6P48664 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC1A6P48664 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC1A6P48664 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC1A6P48664 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC1A6P48664 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
SLC1A6P48664 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC1A6P48664 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SLC1A6P48664 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.62■□□□□ 0.73
SLC1A6P48664 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC1A6P48664 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC1A6P48664 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC1A6P48664 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC1A6P48664 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC1A6P48664 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC1A6P48664 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC1A6P48664 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC1A6P48664 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC1A6P48664 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC1A6P48664 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC1A6P48664 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC1A6P48664 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC1A6P48664 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
SLC1A6P48664 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC1A6P48664 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC1A6P48664 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SLC1A6P48664 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC1A6P48664 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC1A6P48664 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
SLC1A6P48664 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.61■□□□□ 0.73
SLC1A6P48664 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC1A6P48664 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
SLC1A6P48664 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC1A6P48664 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC1A6P48664 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC1A6P48664 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC1A6P48664 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC1A6P48664 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC1A6P48664 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC1A6P48664 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC1A6P48664 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC1A6P48664 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC1A6P48664 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SLC1A6P48664 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC1A6P48664 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC1A6P48664 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC1A6P48664 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC1A6P48664 LINC02228-203ENST00000641970 1355 ntBASIC19.6■□□□□ 0.73
SLC1A6P48664 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.6■□□□□ 0.73
SLC1A6P48664 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC1A6P48664 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC1A6P48664 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC1A6P48664 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC1A6P48664 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC1A6P48664 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.6■□□□□ 0.73
SLC1A6P48664 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC1A6P48664 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC1A6P48664 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.6■□□□□ 0.73
SLC1A6P48664 CDV3P1-201ENST00000471403 739 ntBASIC19.6■□□□□ 0.73
SLC1A6P48664 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.6■□□□□ 0.73
SLC1A6P48664 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC1A6P48664 SLC7A5P1-201ENST00000568957 537 ntBASIC19.6■□□□□ 0.73
SLC1A6P48664 AC009237.14-201ENST00000609975 1594 ntBASIC19.6■□□□□ 0.73
SLC1A6P48664 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC1A6P48664 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC1A6P48664 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SLC1A6P48664 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC1A6P48664 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC1A6P48664 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms