Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
CBX5P45973 TMEM179-206ENST00000616017 1645 ntBASIC17.14■□□□□ 0.33
CBX5P45973 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CBX5P45973 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.14■□□□□ 0.33
CBX5P45973 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CBX5P45973 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CBX5P45973 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CBX5P45973 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.14■□□□□ 0.33
CBX5P45973 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CBX5P45973 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CBX5P45973 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CBX5P45973 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CBX5P45973 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.14■□□□□ 0.33
CBX5P45973 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CBX5P45973 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.14■□□□□ 0.33
CBX5P45973 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.14■□□□□ 0.33
CBX5P45973 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.14■□□□□ 0.33
CBX5P45973 RARRES2P11-201ENST00000635158 484 ntBASIC17.14■□□□□ 0.33
CBX5P45973 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CBX5P45973 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.14■□□□□ 0.33
CBX5P45973 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.14■□□□□ 0.33
CBX5P45973 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CBX5P45973 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CBX5P45973 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.14■□□□□ 0.33
CBX5P45973 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CBX5P45973 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CBX5P45973 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CBX5P45973 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
CBX5P45973 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CBX5P45973 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CBX5P45973 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CBX5P45973 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CBX5P45973 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.14■□□□□ 0.33
CBX5P45973 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX5P45973 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX5P45973 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.13■□□□□ 0.33
CBX5P45973 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.13■□□□□ 0.33
CBX5P45973 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
CBX5P45973 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.13■□□□□ 0.33
CBX5P45973 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.13■□□□□ 0.33
CBX5P45973 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX5P45973 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CBX5P45973 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.13■□□□□ 0.33
CBX5P45973 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CBX5P45973 PKD1P1-201ENST00000458669 6805 ntBASIC17.13■□□□□ 0.33
CBX5P45973 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX5P45973 UNC93B3-201ENST00000308076 687 ntBASIC17.13■□□□□ 0.33
CBX5P45973 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CBX5P45973 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX5P45973 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.13■□□□□ 0.33
CBX5P45973 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX5P45973 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.13■□□□□ 0.33
CBX5P45973 TSPY26P-201ENST00000476365 1326 ntBASIC17.13■□□□□ 0.33
CBX5P45973 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX5P45973 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX5P45973 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX5P45973 KRT16P2-201ENST00000414673 1423 ntBASIC17.13■□□□□ 0.33
CBX5P45973 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.13■□□□□ 0.33
CBX5P45973 AC116050.2-201ENST00000612102 1779 ntBASIC17.12■□□□□ 0.33
CBX5P45973 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CBX5P45973 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX5P45973 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CBX5P45973 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.12■□□□□ 0.33
CBX5P45973 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.12■□□□□ 0.33
CBX5P45973 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX5P45973 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX5P45973 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.12■□□□□ 0.33
CBX5P45973 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.12■□□□□ 0.33
CBX5P45973 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.12■□□□□ 0.33
CBX5P45973 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.12■□□□□ 0.33
CBX5P45973 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.12■□□□□ 0.33
CBX5P45973 AC120498.10-201ENST00000621827 505 ntBASIC17.12■□□□□ 0.33
CBX5P45973 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CBX5P45973 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX5P45973 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX5P45973 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX5P45973 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX5P45973 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.12■□□□□ 0.33
CBX5P45973 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CBX5P45973 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX5P45973 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CBX5P45973 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CBX5P45973 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CBX5P45973 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX5P45973 AC020763.4-201ENST00000623414 4170 ntBASIC17.11■□□□□ 0.33
CBX5P45973 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX5P45973 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX5P45973 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX5P45973 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX5P45973 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.11■□□□□ 0.33
CBX5P45973 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CBX5P45973 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CBX5P45973 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX5P45973 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX5P45973 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.11■□□□□ 0.33
CBX5P45973 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CBX5P45973 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.1■□□□□ 0.33
CBX5P45973 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX5P45973 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CBX5P45973 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms