Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.92■□□□□ 0.94
SLC1A1P43005 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC1A1P43005 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC1A1P43005 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SLC1A1P43005 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.92■□□□□ 0.94
SLC1A1P43005 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.92■□□□□ 0.94
SLC1A1P43005 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC1A1P43005 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC1A1P43005 HLA-G-202ENST00000376815 851 ntBASIC20.91■□□□□ 0.94
SLC1A1P43005 HLA-G-203ENST00000376818 1127 ntBASIC20.91■□□□□ 0.94
SLC1A1P43005 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.91■□□□□ 0.94
SLC1A1P43005 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SLC1A1P43005 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC1A1P43005 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.91■□□□□ 0.94
SLC1A1P43005 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.91■□□□□ 0.94
SLC1A1P43005 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.91■□□□□ 0.94
SLC1A1P43005 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
SLC1A1P43005 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.91■□□□□ 0.94
SLC1A1P43005 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.91■□□□□ 0.94
SLC1A1P43005 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.91■□□□□ 0.94
SLC1A1P43005 TREX1-205ENST00000625293 1783 ntBASIC20.91■□□□□ 0.94
SLC1A1P43005 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.91■□□□□ 0.94
SLC1A1P43005 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SLC1A1P43005 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC1A1P43005 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC1A1P43005 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.9■□□□□ 0.94
SLC1A1P43005 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC1A1P43005 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.9■□□□□ 0.94
SLC1A1P43005 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC1A1P43005 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC1A1P43005 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC1A1P43005 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.9■□□□□ 0.94
SLC1A1P43005 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC1A1P43005 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC1A1P43005 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC1A1P43005 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC1A1P43005 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC1A1P43005 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC1A1P43005 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC1A1P43005 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC1A1P43005 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.9■□□□□ 0.94
SLC1A1P43005 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC1A1P43005 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.9■□□□□ 0.94
SLC1A1P43005 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.9■□□□□ 0.94
SLC1A1P43005 MIR5787-201ENST00000611784 55 ntBASIC20.9■□□□□ 0.94
SLC1A1P43005 AL589743.5-201ENST00000616611 1050 ntBASIC20.9■□□□□ 0.94
SLC1A1P43005 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC1A1P43005 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC1A1P43005 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC1A1P43005 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.9■□□□□ 0.94
SLC1A1P43005 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SLC1A1P43005 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SLC1A1P43005 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SLC1A1P43005 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SLC1A1P43005 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
SLC1A1P43005 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
SLC1A1P43005 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SLC1A1P43005 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SLC1A1P43005 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
SLC1A1P43005 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC1A1P43005 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SLC1A1P43005 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC1A1P43005 AL512625.2-201ENST00000417533 625 ntBASIC20.89■□□□□ 0.93
SLC1A1P43005 AL162430.1-201ENST00000480705 870 ntBASIC20.89■□□□□ 0.93
SLC1A1P43005 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SLC1A1P43005 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.89■□□□□ 0.93
SLC1A1P43005 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.89■□□□□ 0.93
SLC1A1P43005 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC1A1P43005 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.89■□□□□ 0.93
SLC1A1P43005 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC1A1P43005 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.89■□□□□ 0.93
SLC1A1P43005 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC1A1P43005 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.88■□□□□ 0.93
SLC1A1P43005 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC1A1P43005 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.88■□□□□ 0.93
SLC1A1P43005 AC010980.2-201ENST00000587099 1412 ntBASIC20.88■□□□□ 0.93
SLC1A1P43005 AC116562.4-201ENST00000641316 2276 ntBASIC20.88■□□□□ 0.93
SLC1A1P43005 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SLC1A1P43005 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLC1A1P43005 AL355472.2-201ENST00000422958 438 ntBASIC20.88■□□□□ 0.93
SLC1A1P43005 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLC1A1P43005 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.88■□□□□ 0.93
SLC1A1P43005 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLC1A1P43005 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.88■□□□□ 0.93
SLC1A1P43005 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.88■□□□□ 0.93
SLC1A1P43005 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.88■□□□□ 0.93
SLC1A1P43005 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.88■□□□□ 0.93
SLC1A1P43005 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.88■□□□□ 0.93
SLC1A1P43005 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SLC1A1P43005 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.88■□□□□ 0.93
SLC1A1P43005 AP001271.2-201ENST00000624018 1556 ntBASIC20.88■□□□□ 0.93
SLC1A1P43005 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
SLC1A1P43005 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC1A1P43005 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC1A1P43005 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SLC1A1P43005 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC1A1P43005 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SLC1A1P43005 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.87■□□□□ 0.93
SLC1A1P43005 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC1A1P43005 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms