Protein–RNA interactions for Protein: P40020

FIR1, Factor interacting with REF2, yeastyeast

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
FIR1P40020 SET3YKR029C 2256 nt1.99□□□□□ -2.09
FIR1P40020 SEC21YNL287W 2808 nt1.99□□□□□ -2.09
FIR1P40020 TRM732YMR259C 4263 nt1.98□□□□□ -2.09
FIR1P40020 YLR232WYLR232W 348 nt1.98□□□□□ -2.09
FIR1P40020 YOR093CYOR093C 4947 nt1.97□□□□□ -2.09
FIR1P40020 UBP2YOR124C 3819 nt1.97□□□□□ -2.09
FIR1P40020 STO1YMR125W 2586 nt1.97□□□□□ -2.09
FIR1P40020 SEC3YER008C 4011 nt1.96□□□□□ -2.1
FIR1P40020 snR190snR190 190 nt1.96□□□□□ -2.1
FIR1P40020 YDL073WYDL073W 2955 nt1.96□□□□□ -2.1
FIR1P40020 BIR1YJR089W 2865 nt1.95□□□□□ -2.1
FIR1P40020 YLL066W-BYLL066W-B 171 nt1.95□□□□□ -2.1
FIR1P40020 NEO1YIL048W 3456 nt1.95□□□□□ -2.1
FIR1P40020 CDC25YLR310C 4770 nt1.94□□□□□ -2.1
FIR1P40020 SAC3YDR159W 3906 nt1.94□□□□□ -2.1
FIR1P40020 SMC1YFL008W 3678 nt1.94□□□□□ -2.1
FIR1P40020 snR45snR45 172 nt1.93□□□□□ -2.1
FIR1P40020 MON2YNL297C 4911 nt1.93□□□□□ -2.1
FIR1P40020 YHR214C-BYHR214C-B 5382 nt1.92□□□□□ -2.1
FIR1P40020 RPL26BYGR034W 384 nt1.92□□□□□ -2.1
FIR1P40020 YGR146C-AYGR146C-A 162 nt1.92□□□□□ -2.1
FIR1P40020 DNF3YMR162C 4971 nt1.92□□□□□ -2.1
FIR1P40020 SEC1YDR164C 2175 nt1.92□□□□□ -2.1
FIR1P40020 CHS1YNL192W 3396 nt1.92□□□□□ -2.1
FIR1P40020 BPH1YCR032W 6504 nt1.91□□□□□ -2.1
FIR1P40020 YJL127W-AYJL127W-A 117 nt1.91□□□□□ -2.1
FIR1P40020 YAL037C-AYAL037C-A 93 nt1.91□□□□□ -2.1
FIR1P40020 WAR1YML076C 2835 nt1.9□□□□□ -2.1
FIR1P40020 APL3YBL037W 3078 nt1.9□□□□□ -2.1
FIR1P40020 YNL266WYNL266W 420 nt1.9□□□□□ -2.11
FIR1P40020 YBR072C-AYBR072C-A 162 nt1.9□□□□□ -2.11
FIR1P40020 SWI4YER111C 3282 nt1.9□□□□□ -2.11
FIR1P40020 FIG2YCR089W 4830 nt1.88□□□□□ -2.11
FIR1P40020 YMR045CYMR045C 5268 nt1.87□□□□□ -2.11
FIR1P40020 TMA7YLR262C-A 195 nt1.86□□□□□ -2.11
FIR1P40020 YGR130CYGR130C 2451 nt1.86□□□□□ -2.11
FIR1P40020 MSH3YCR092C 3057 nt1.85□□□□□ -2.11
FIR1P40020 CFT1YDR301W 4074 nt1.85□□□□□ -2.11
FIR1P40020 NUP145YGL092W 3954 nt1.81□□□□□ -2.12
FIR1P40020 snR62snR62 100 nt1.81□□□□□ -2.12
FIR1P40020 YBR200W-AYBR200W-A 165 nt1.8□□□□□ -2.12
FIR1P40020 PRP16YKR086W 3216 nt1.8□□□□□ -2.12
FIR1P40020 CAT8YMR280C 4302 nt1.8□□□□□ -2.12
FIR1P40020 BRR2YER172C 6492 nt1.79□□□□□ -2.12
FIR1P40020 GEA2YEL022W 4380 nt1.79□□□□□ -2.12
FIR1P40020 PKH3YDR466W 2697 nt1.79□□□□□ -2.12
FIR1P40020 SEC8YPR055W 3198 nt1.78□□□□□ -2.12
FIR1P40020 CLU1YMR012W 3834 nt1.77□□□□□ -2.13
FIR1P40020 NUP188YML103C 4968 nt1.76□□□□□ -2.13
FIR1P40020 BST1YFL025C 3090 nt1.76□□□□□ -2.13
FIR1P40020 CDC39YCR093W 6327 nt1.76□□□□□ -2.13
FIR1P40020 YBL071C-BYBL071C-B 99 nt1.74□□□□□ -2.13
FIR1P40020 YOL083C-AYOL083C-A 141 nt1.73□□□□□ -2.13
FIR1P40020 YPR160W-AYPR160W-A 81 nt1.73□□□□□ -2.13
FIR1P40020 NNF2YGR089W 2811 nt1.72□□□□□ -2.13
FIR1P40020 AZF1YOR113W 2745 nt1.72□□□□□ -2.13
FIR1P40020 tN(GUU)QtN(GUU)Q 71 nt1.72□□□□□ -2.13
FIR1P40020 YLR399W-AYLR399W-A 105 nt1.72□□□□□ -2.13
FIR1P40020 YPL060C-AYPL060C-A 3315 nt1.71□□□□□ -2.14
FIR1P40020 LAA1YJL207C 6045 nt1.71□□□□□ -2.14
FIR1P40020 MSN5YDR335W 3675 nt1.71□□□□□ -2.14
FIR1P40020 EST2YLR318W 2655 nt1.71□□□□□ -2.14
FIR1P40020 RPS26AYGL189C 360 nt1.7□□□□□ -2.14
FIR1P40020 YMR247W-AYMR247W-A 144 nt1.68□□□□□ -2.14
FIR1P40020 YBR196C-AYBR196C-A 150 nt1.68□□□□□ -2.14
FIR1P40020 PIK1YNL267W 3201 nt1.68□□□□□ -2.14
FIR1P40020 YSP1YHR155W 3687 nt1.67□□□□□ -2.14
FIR1P40020 IML1YJR138W 4755 nt1.66□□□□□ -2.14
FIR1P40020 tT(UGU)HtT(UGU)H 72 nt1.65□□□□□ -2.15
FIR1P40020 SEC10YLR166C 2616 nt1.65□□□□□ -2.15
FIR1P40020 ULP2YIL031W 3105 nt1.64□□□□□ -2.15
FIR1P40020 MEC1YBR136W 7107 nt1.63□□□□□ -2.15
FIR1P40020 UBP3YER151C 2739 nt1.63□□□□□ -2.15
FIR1P40020 BEM3YPL115C 3387 nt1.62□□□□□ -2.15
FIR1P40020 FYV8YGR196C 2454 nt1.62□□□□□ -2.15
FIR1P40020 VPS15YBR097W 4365 nt1.61□□□□□ -2.15
FIR1P40020 GLG1YKR058W 1851 nt1.6□□□□□ -2.15
FIR1P40020 YOL164W-AYOL164W-A 183 nt1.58□□□□□ -2.16
FIR1P40020 YNL284C-BYNL284C-B 5268 nt1.56□□□□□ -2.16
FIR1P40020 YDR034C-AYDR034C-A 177 nt1.55□□□□□ -2.16
FIR1P40020 tF(GAA)BtF(GAA)B 73 nt1.54□□□□□ -2.16
FIR1P40020 tF(GAA)FtF(GAA)F 73 nt1.54□□□□□ -2.16
FIR1P40020 tF(GAA)GtF(GAA)G 73 nt1.54□□□□□ -2.16
FIR1P40020 tF(GAA)H1tF(GAA)H1 73 nt1.54□□□□□ -2.16
FIR1P40020 tF(GAA)H2tF(GAA)H2 73 nt1.54□□□□□ -2.16
FIR1P40020 tF(GAA)MtF(GAA)M 73 nt1.54□□□□□ -2.16
FIR1P40020 tF(GAA)P1tF(GAA)P1 73 nt1.54□□□□□ -2.16
FIR1P40020 tF(GAA)P2tF(GAA)P2 73 nt1.54□□□□□ -2.16
FIR1P40020 YGR240C-AYGR240C-A 201 nt1.54□□□□□ -2.16
FIR1P40020 YLR286W-AYLR286W-A 135 nt1.54□□□□□ -2.16
FIR1P40020 tH(GUG)E1tH(GUG)E1 72 nt1.53□□□□□ -2.16
FIR1P40020 tH(GUG)E2tH(GUG)E2 72 nt1.53□□□□□ -2.16
FIR1P40020 tH(GUG)G1tH(GUG)G1 72 nt1.53□□□□□ -2.16
FIR1P40020 tH(GUG)G2tH(GUG)G2 72 nt1.53□□□□□ -2.16
FIR1P40020 tH(GUG)HtH(GUG)H 72 nt1.53□□□□□ -2.16
FIR1P40020 tH(GUG)KtH(GUG)K 72 nt1.53□□□□□ -2.16
FIR1P40020 tH(GUG)MtH(GUG)M 72 nt1.53□□□□□ -2.16
FIR1P40020 YBL100W-CYBL100W-C 120 nt1.52□□□□□ -2.17
FIR1P40020 NST1YNL091W 3723 nt1.5□□□□□ -2.17
FIR1P40020 SPC110YDR356W 2835 nt1.49□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 15 ms