Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GDNFP39905 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GDNFP39905 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GDNFP39905 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GDNFP39905 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GDNFP39905 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
GDNFP39905 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GDNFP39905 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.35■□□□□ 0.37
GDNFP39905 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GDNFP39905 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.35■□□□□ 0.37
GDNFP39905 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
GDNFP39905 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GDNFP39905 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GDNFP39905 AC079140.4-201ENST00000507448 529 ntBASIC17.35■□□□□ 0.37
GDNFP39905 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.35■□□□□ 0.37
GDNFP39905 TERF1P2-201ENST00000583350 1212 ntBASIC17.35■□□□□ 0.37
GDNFP39905 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GDNFP39905 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GDNFP39905 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GDNFP39905 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GDNFP39905 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GDNFP39905 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GDNFP39905 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GDNFP39905 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GDNFP39905 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GDNFP39905 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.34■□□□□ 0.37
GDNFP39905 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.34■□□□□ 0.37
GDNFP39905 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GDNFP39905 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
GDNFP39905 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
GDNFP39905 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
GDNFP39905 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GDNFP39905 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
GDNFP39905 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.34■□□□□ 0.37
GDNFP39905 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
GDNFP39905 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GDNFP39905 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GDNFP39905 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.34■□□□□ 0.37
GDNFP39905 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.34■□□□□ 0.37
GDNFP39905 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.34■□□□□ 0.37
GDNFP39905 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GDNFP39905 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GDNFP39905 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GDNFP39905 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GDNFP39905 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.33■□□□□ 0.37
GDNFP39905 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GDNFP39905 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.33■□□□□ 0.37
GDNFP39905 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GDNFP39905 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
GDNFP39905 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
GDNFP39905 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GDNFP39905 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.33■□□□□ 0.37
GDNFP39905 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GDNFP39905 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
GDNFP39905 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
GDNFP39905 AC019069.1-201ENST00000610008 1333 ntBASIC17.33■□□□□ 0.36
GDNFP39905 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
GDNFP39905 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
GDNFP39905 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.33■□□□□ 0.36
GDNFP39905 EEF1DP3-203ENST00000566025 782 ntBASIC17.33■□□□□ 0.36
GDNFP39905 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
GDNFP39905 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.33■□□□□ 0.36
GDNFP39905 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GDNFP39905 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.33■□□□□ 0.36
GDNFP39905 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
GDNFP39905 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
GDNFP39905 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.33■□□□□ 0.36
GDNFP39905 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GDNFP39905 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GDNFP39905 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GDNFP39905 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.32■□□□□ 0.36
GDNFP39905 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
GDNFP39905 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GDNFP39905 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
GDNFP39905 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
GDNFP39905 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GDNFP39905 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GDNFP39905 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GDNFP39905 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GDNFP39905 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GDNFP39905 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
GDNFP39905 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.32■□□□□ 0.36
GDNFP39905 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GDNFP39905 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.32■□□□□ 0.36
GDNFP39905 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
GDNFP39905 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.32■□□□□ 0.36
GDNFP39905 KRT18P14-201ENST00000534205 1250 ntBASIC17.32■□□□□ 0.36
GDNFP39905 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GDNFP39905 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
GDNFP39905 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GDNFP39905 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
GDNFP39905 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.32■□□□□ 0.36
GDNFP39905 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GDNFP39905 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.32■□□□□ 0.36
GDNFP39905 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
GDNFP39905 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.32■□□□□ 0.36
GDNFP39905 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.31■□□□□ 0.36
GDNFP39905 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
GDNFP39905 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GDNFP39905 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms