Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPL3P39023 PTBP1P-201ENST00000554374 1601 ntBASIC18.96■□□□□ 0.63
RPL3P39023 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.96■□□□□ 0.63
RPL3P39023 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPL3P39023 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPL3P39023 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPL3P39023 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPL3P39023 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPL3P39023 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPL3P39023 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.96■□□□□ 0.63
RPL3P39023 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPL3P39023 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.96■□□□□ 0.63
RPL3P39023 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.96■□□□□ 0.63
RPL3P39023 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.96■□□□□ 0.63
RPL3P39023 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPL3P39023 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPL3P39023 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPL3P39023 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPL3P39023 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.96■□□□□ 0.63
RPL3P39023 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RPL3P39023 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPL3P39023 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPL3P39023 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.95■□□□□ 0.62
RPL3P39023 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
RPL3P39023 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.95■□□□□ 0.62
RPL3P39023 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.95■□□□□ 0.62
RPL3P39023 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.95■□□□□ 0.62
RPL3P39023 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPL3P39023 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.95■□□□□ 0.62
RPL3P39023 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPL3P39023 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPL3P39023 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.95■□□□□ 0.62
RPL3P39023 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPL3P39023 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPL3P39023 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.94■□□□□ 0.62
RPL3P39023 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.94■□□□□ 0.62
RPL3P39023 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.94■□□□□ 0.62
RPL3P39023 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.94■□□□□ 0.62
RPL3P39023 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPL3P39023 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPL3P39023 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.94■□□□□ 0.62
RPL3P39023 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPL3P39023 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPL3P39023 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPL3P39023 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.94■□□□□ 0.62
RPL3P39023 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.94■□□□□ 0.62
RPL3P39023 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.94■□□□□ 0.62
RPL3P39023 AL162430.1-201ENST00000480705 870 ntBASIC18.94■□□□□ 0.62
RPL3P39023 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.94■□□□□ 0.62
RPL3P39023 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
RPL3P39023 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RPL3P39023 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RPL3P39023 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPL3P39023 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.94■□□□□ 0.62
RPL3P39023 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RPL3P39023 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RPL3P39023 AC009237.14-201ENST00000609975 1594 ntBASIC18.93■□□□□ 0.62
RPL3P39023 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPL3P39023 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPL3P39023 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RPL3P39023 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.93■□□□□ 0.62
RPL3P39023 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.93■□□□□ 0.62
RPL3P39023 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPL3P39023 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPL3P39023 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPL3P39023 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RPL3P39023 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPL3P39023 AL512625.2-201ENST00000417533 625 ntBASIC18.93■□□□□ 0.62
RPL3P39023 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RPL3P39023 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.93■□□□□ 0.62
RPL3P39023 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.93■□□□□ 0.62
RPL3P39023 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.93■□□□□ 0.62
RPL3P39023 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RPL3P39023 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.93■□□□□ 0.62
RPL3P39023 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPL3P39023 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RPL3P39023 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPL3P39023 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPL3P39023 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPL3P39023 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPL3P39023 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPL3P39023 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPL3P39023 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.92■□□□□ 0.62
RPL3P39023 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.92■□□□□ 0.62
RPL3P39023 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPL3P39023 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
RPL3P39023 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPL3P39023 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.92■□□□□ 0.62
RPL3P39023 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPL3P39023 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPL3P39023 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.92■□□□□ 0.62
RPL3P39023 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.92■□□□□ 0.62
RPL3P39023 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.92■□□□□ 0.62
RPL3P39023 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RPL3P39023 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPL3P39023 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RPL3P39023 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPL3P39023 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPL3P39023 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.92■□□□□ 0.62
RPL3P39023 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms