Protein–RNA interactions for Protein: P38344

REI1, Cytoplasmic 60S subunit biogenesis factor REI1, yeastyeast

Predicted RBP Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
REI1P38344 YLR232WYLR232W 348 nt1.88□□□□□ -2.11
REI1P38344 FYV10YIL097W 1551 nt1.88□□□□□ -2.11
REI1P38344 SMC4YLR086W 4257 nt1.88□□□□□ -2.11
REI1P38344 RAD9YDR217C 3930 nt1.87□□□□□ -2.11
REI1P38344 FIG2YCR089W 4830 nt1.86□□□□□ -2.11
REI1P38344 YJL127W-AYJL127W-A 117 nt1.86□□□□□ -2.11
REI1P38344 BIR1YJR089W 2865 nt1.86□□□□□ -2.11
REI1P38344 RPM2YML091C 3609 nt1.85□□□□□ -2.11
REI1P38344 YAL037C-AYAL037C-A 93 nt1.85□□□□□ -2.11
REI1P38344 ROM2YLR371W 4071 nt1.85□□□□□ -2.11
REI1P38344 BPH1YCR032W 6504 nt1.84□□□□□ -2.11
REI1P38344 snR190snR190 190 nt1.84□□□□□ -2.11
REI1P38344 SET3YKR029C 2256 nt1.83□□□□□ -2.12
REI1P38344 STO1YMR125W 2586 nt1.83□□□□□ -2.12
REI1P38344 YNL266WYNL266W 420 nt1.83□□□□□ -2.12
REI1P38344 SEC1YDR164C 2175 nt1.82□□□□□ -2.12
REI1P38344 ASE1YOR058C 2658 nt1.82□□□□□ -2.12
REI1P38344 YGR146C-AYGR146C-A 162 nt1.82□□□□□ -2.12
REI1P38344 YBR072C-AYBR072C-A 162 nt1.82□□□□□ -2.12
REI1P38344 RPL26BYGR034W 384 nt1.81□□□□□ -2.12
REI1P38344 WAR1YML076C 2835 nt1.79□□□□□ -2.12
REI1P38344 SAC3YDR159W 3906 nt1.77□□□□□ -2.13
REI1P38344 snR62snR62 100 nt1.77□□□□□ -2.13
REI1P38344 MON2YNL297C 4911 nt1.77□□□□□ -2.13
REI1P38344 SEC3YER008C 4011 nt1.76□□□□□ -2.13
REI1P38344 CDC25YLR310C 4770 nt1.76□□□□□ -2.13
REI1P38344 IRA1YBR140C 9279 nt1.76□□□□□ -2.13
REI1P38344 SPC110YDR356W 2835 nt1.76□□□□□ -2.13
REI1P38344 CFT1YDR301W 4074 nt1.75□□□□□ -2.13
REI1P38344 YDL073WYDL073W 2955 nt1.75□□□□□ -2.13
REI1P38344 SWI4YER111C 3282 nt1.74□□□□□ -2.13
REI1P38344 CHS1YNL192W 3396 nt1.74□□□□□ -2.13
REI1P38344 TRM732YMR259C 4263 nt1.73□□□□□ -2.13
REI1P38344 APL3YBL037W 3078 nt1.73□□□□□ -2.13
REI1P38344 GEA2YEL022W 4380 nt1.71□□□□□ -2.14
REI1P38344 YOL083C-AYOL083C-A 141 nt1.7□□□□□ -2.14
REI1P38344 YBR200W-AYBR200W-A 165 nt1.69□□□□□ -2.14
REI1P38344 PIK1YNL267W 3201 nt1.68□□□□□ -2.14
REI1P38344 NUP145YGL092W 3954 nt1.67□□□□□ -2.14
REI1P38344 YBL071C-BYBL071C-B 99 nt1.67□□□□□ -2.14
REI1P38344 SEC8YPR055W 3198 nt1.67□□□□□ -2.14
REI1P38344 BRR2YER172C 6492 nt1.66□□□□□ -2.14
REI1P38344 PMD1YER132C 5262 nt1.66□□□□□ -2.14
REI1P38344 HKR1YDR420W 5409 nt1.65□□□□□ -2.14
REI1P38344 tQ(UUG)E2tQ(UUG)E2 72 nt1.64□□□□□ -2.15
REI1P38344 YBR196C-AYBR196C-A 150 nt1.64□□□□□ -2.15
REI1P38344 NUP192YJL039C 5052 nt1.64□□□□□ -2.15
REI1P38344 BST1YFL025C 3090 nt1.63□□□□□ -2.15
REI1P38344 MEC1YBR136W 7107 nt1.62□□□□□ -2.15
REI1P38344 NUP188YML103C 4968 nt1.62□□□□□ -2.15
REI1P38344 CCH1YGR217W 6120 nt1.62□□□□□ -2.15
REI1P38344 RPS26AYGL189C 360 nt1.61□□□□□ -2.15
REI1P38344 YLR399W-AYLR399W-A 105 nt1.61□□□□□ -2.15
REI1P38344 AZF1YOR113W 2745 nt1.61□□□□□ -2.15
REI1P38344 PRP16YKR086W 3216 nt1.61□□□□□ -2.15
REI1P38344 PET127YOR017W 2403 nt1.6□□□□□ -2.15
REI1P38344 tN(GUU)QtN(GUU)Q 71 nt1.6□□□□□ -2.15
REI1P38344 BEM3YPL115C 3387 nt1.6□□□□□ -2.15
REI1P38344 NNF2YGR089W 2811 nt1.6□□□□□ -2.15
REI1P38344 YPR160W-AYPR160W-A 81 nt1.59□□□□□ -2.15
REI1P38344 SSK2YNR031C 4740 nt1.58□□□□□ -2.16
REI1P38344 SEC10YLR166C 2616 nt1.57□□□□□ -2.16
REI1P38344 SXM1YDR395W 2835 nt1.57□□□□□ -2.16
REI1P38344 UBP3YER151C 2739 nt1.57□□□□□ -2.16
REI1P38344 YSP1YHR155W 3687 nt1.56□□□□□ -2.16
REI1P38344 CDC39YCR093W 6327 nt1.56□□□□□ -2.16
REI1P38344 YDR034C-AYDR034C-A 177 nt1.56□□□□□ -2.16
REI1P38344 EST2YLR318W 2655 nt1.56□□□□□ -2.16
REI1P38344 YBL100W-CYBL100W-C 120 nt1.55□□□□□ -2.16
REI1P38344 CLU1YMR012W 3834 nt1.55□□□□□ -2.16
REI1P38344 FYV8YGR196C 2454 nt1.54□□□□□ -2.16
REI1P38344 ANS1YHR126C 480 nt1.54□□□□□ -2.16
REI1P38344 YOL164W-AYOL164W-A 183 nt1.54□□□□□ -2.16
REI1P38344 MSN5YDR335W 3675 nt1.54□□□□□ -2.16
REI1P38344 ULP2YIL031W 3105 nt1.53□□□□□ -2.17
REI1P38344 GLG1YKR058W 1851 nt1.52□□□□□ -2.17
REI1P38344 YGR240C-AYGR240C-A 201 nt1.51□□□□□ -2.17
REI1P38344 MSH3YCR092C 3057 nt1.5□□□□□ -2.17
REI1P38344 YLR286W-AYLR286W-A 135 nt1.49□□□□□ -2.17
REI1P38344 CAT8YMR280C 4302 nt1.47□□□□□ -2.17
REI1P38344 YPL060C-AYPL060C-A 3315 nt1.45□□□□□ -2.18
REI1P38344 tD(GUC)QtD(GUC)Q 75 nt1.43□□□□□ -2.18
REI1P38344 snR47snR47 99 nt1.41□□□□□ -2.18
REI1P38344 ORC3YLL004W 1851 nt1.39□□□□□ -2.19
REI1P38344 EST1YLR233C 2100 nt1.39□□□□□ -2.19
REI1P38344 LAA1YJL207C 6045 nt1.37□□□□□ -2.19
REI1P38344 snR69snR69 101 nt1.37□□□□□ -2.19
REI1P38344 CSE1YGL238W 2883 nt1.36□□□□□ -2.19
REI1P38344 YLR299C-AYLR299C-A 93 nt1.34□□□□□ -2.19
REI1P38344 NST1YNL091W 3723 nt1.34□□□□□ -2.2
REI1P38344 YGR130CYGR130C 2451 nt1.33□□□□□ -2.2
REI1P38344 tH(GUG)E1tH(GUG)E1 72 nt1.31□□□□□ -2.2
REI1P38344 tH(GUG)E2tH(GUG)E2 72 nt1.31□□□□□ -2.2
REI1P38344 tH(GUG)G1tH(GUG)G1 72 nt1.31□□□□□ -2.2
REI1P38344 tH(GUG)G2tH(GUG)G2 72 nt1.31□□□□□ -2.2
REI1P38344 tH(GUG)HtH(GUG)H 72 nt1.31□□□□□ -2.2
REI1P38344 tH(GUG)KtH(GUG)K 72 nt1.31□□□□□ -2.2
REI1P38344 tH(GUG)MtH(GUG)M 72 nt1.31□□□□□ -2.2
REI1P38344 YLL006W-AYLL006W-A 177 nt1.31□□□□□ -2.2
REI1P38344 HUG1YML058W-A 207 nt1.31□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 7.8 ms