Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM23P36406 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM23P36406 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM23P36406 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM23P36406 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM23P36406 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
TRIM23P36406 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM23P36406 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM23P36406 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TRIM23P36406 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM23P36406 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.71■□□□□ 0.75
TRIM23P36406 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM23P36406 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.71■□□□□ 0.75
TRIM23P36406 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM23P36406 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.71■□□□□ 0.75
TRIM23P36406 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM23P36406 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM23P36406 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM23P36406 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
TRIM23P36406 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM23P36406 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.7■□□□□ 0.74
TRIM23P36406 PKD1P6-201ENST00000343738 4769 ntBASIC19.7■□□□□ 0.74
TRIM23P36406 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM23P36406 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.7■□□□□ 0.74
TRIM23P36406 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM23P36406 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.7■□□□□ 0.74
TRIM23P36406 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM23P36406 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
TRIM23P36406 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM23P36406 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.7■□□□□ 0.74
TRIM23P36406 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM23P36406 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM23P36406 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
TRIM23P36406 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM23P36406 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM23P36406 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM23P36406 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM23P36406 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIM23P36406 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM23P36406 MIR718-201ENST00000390190 70 ntBASIC19.69■□□□□ 0.74
TRIM23P36406 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM23P36406 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM23P36406 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM23P36406 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIM23P36406 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM23P36406 Z99916.2-201ENST00000604037 246 ntBASIC19.69■□□□□ 0.74
TRIM23P36406 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIM23P36406 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM23P36406 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIM23P36406 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM23P36406 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM23P36406 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM23P36406 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.68■□□□□ 0.74
TRIM23P36406 KRT16P6-202ENST00000425692 1426 ntBASIC19.68■□□□□ 0.74
TRIM23P36406 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM23P36406 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.68■□□□□ 0.74
TRIM23P36406 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.68■□□□□ 0.74
TRIM23P36406 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM23P36406 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.68■□□□□ 0.74
TRIM23P36406 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.68■□□□□ 0.74
TRIM23P36406 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM23P36406 SMG8-203ENST00000578922 2178 ntBASIC19.68■□□□□ 0.74
TRIM23P36406 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TRIM23P36406 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM23P36406 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM23P36406 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM23P36406 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TRIM23P36406 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM23P36406 AC020907.5-201ENST00000624372 1936 ntBASIC19.67■□□□□ 0.74
TRIM23P36406 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.67■□□□□ 0.74
TRIM23P36406 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM23P36406 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
TRIM23P36406 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TRIM23P36406 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM23P36406 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM23P36406 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM23P36406 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM23P36406 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM23P36406 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM23P36406 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM23P36406 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM23P36406 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM23P36406 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM23P36406 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TRIM23P36406 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
TRIM23P36406 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM23P36406 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.67■□□□□ 0.74
TRIM23P36406 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM23P36406 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM23P36406 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM23P36406 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM23P36406 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM23P36406 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.66■□□□□ 0.74
TRIM23P36406 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM23P36406 AL596275.1-201ENST00000423464 877 ntBASIC19.66■□□□□ 0.74
TRIM23P36406 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TRIM23P36406 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM23P36406 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.66■□□□□ 0.74
TRIM23P36406 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM23P36406 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms