Protein–RNA interactions for Protein: P32828

SLX5, E3 ubiquitin-protein ligase complex SLX5-SLX8 subunit SLX5, yeastyeast

Known RBP Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SLX5P32828 MSH3YCR092C 3057 nt2.77□□□□□ -1.97
SLX5P32828 RAD50YNL250W 3939 nt2.76□□□□□ -1.97
SLX5P32828 DYN1YKR054C 12279 nt2.76□□□□□ -1.97
SLX5P32828 UTP21YLR409C 2820 nt2.76□□□□□ -1.97
SLX5P32828 STH1YIL126W 4080 nt2.76□□□□□ -1.97
SLX5P32828 TOM1YDR457W 9807 nt2.76□□□□□ -1.97
SLX5P32828 SEC7YDR170C 6030 nt2.75□□□□□ -1.97
SLX5P32828 HUG1YML058W-A 207 nt2.74□□□□□ -1.97
SLX5P32828 ESC1YMR219W 4977 nt2.73□□□□□ -1.97
SLX5P32828 DNA2YHR164C 4569 nt2.73□□□□□ -1.97
SLX5P32828 YPL216WYPL216W 3309 nt2.72□□□□□ -1.97
SLX5P32828 YIL082W-AYIL082W-A 4497 nt2.72□□□□□ -1.97
SLX5P32828 ECM29YHL030W 5607 nt2.71□□□□□ -1.98
SLX5P32828 tW(CCA)G1tW(CCA)G1 72 nt2.71□□□□□ -1.98
SLX5P32828 tW(CCA)G2tW(CCA)G2 72 nt2.71□□□□□ -1.98
SLX5P32828 tW(CCA)JtW(CCA)J 72 nt2.71□□□□□ -1.98
SLX5P32828 tW(CCA)KtW(CCA)K 72 nt2.71□□□□□ -1.98
SLX5P32828 tW(CCA)MtW(CCA)M 72 nt2.71□□□□□ -1.98
SLX5P32828 tW(CCA)PtW(CCA)P 72 nt2.71□□□□□ -1.98
SLX5P32828 MSN5YDR335W 3675 nt2.7□□□□□ -1.98
SLX5P32828 CDC25YLR310C 4770 nt2.68□□□□□ -1.98
SLX5P32828 GEA1YJR031C 4227 nt2.67□□□□□ -1.98
SLX5P32828 FAR11YNL127W 2862 nt2.67□□□□□ -1.98
SLX5P32828 tQ(UUG)QtQ(UUG)Q 76 nt2.66□□□□□ -1.98
SLX5P32828 YLR399W-AYLR399W-A 105 nt2.66□□□□□ -1.98
SLX5P32828 UTP22YGR090W 3714 nt2.65□□□□□ -1.98
SLX5P32828 KAP122YGL016W 3246 nt2.65□□□□□ -1.99
SLX5P32828 GIP3YPL137C 3831 nt2.64□□□□□ -1.99
SLX5P32828 GEA2YEL022W 4380 nt2.63□□□□□ -1.99
SLX5P32828 AXL1YPR122W 3627 nt2.61□□□□□ -1.99
SLX5P32828 SPF1YEL031W 3648 nt2.61□□□□□ -1.99
SLX5P32828 YLR419WYLR419W 4308 nt2.61□□□□□ -1.99
SLX5P32828 ESL2YKR096W 3588 nt2.6□□□□□ -1.99
SLX5P32828 YMR160WYMR160W 2451 nt2.59□□□□□ -1.99
SLX5P32828 FKS3YMR306W 5358 nt2.59□□□□□ -1.99
SLX5P32828 YER090C-AYER090C-A 90 nt2.59□□□□□ -1.99
SLX5P32828 UBP2YOR124C 3819 nt2.59□□□□□ -2
SLX5P32828 FYV8YGR196C 2454 nt2.58□□□□□ -2
SLX5P32828 YBL005W-BYBL005W-B 5268 nt2.58□□□□□ -2
SLX5P32828 BCK1YJL095W 4437 nt2.57□□□□□ -2
SLX5P32828 NUM1YDR150W 8247 nt2.55□□□□□ -2
SLX5P32828 YKL106C-AYKL106C-A 120 nt2.55□□□□□ -2
SLX5P32828 CYR1YJL005W 6081 nt2.55□□□□□ -2
SLX5P32828 ATG9YDL149W 2994 nt2.54□□□□□ -2
SLX5P32828 TOP2YNL088W 4287 nt2.54□□□□□ -2
SLX5P32828 TOR1YJR066W 7413 nt2.53□□□□□ -2
SLX5P32828 CSF1YLR087C 8877 nt2.52□□□□□ -2.01
SLX5P32828 BNR1YIL159W 4128 nt2.52□□□□□ -2.01
SLX5P32828 RAV1YJR033C 4074 nt2.52□□□□□ -2.01
SLX5P32828 TRA1YHR099W 11235 nt2.52□□□□□ -2.01
SLX5P32828 SMC4YLR086W 4257 nt2.5□□□□□ -2.01
SLX5P32828 SGS1YMR190C 4344 nt2.47□□□□□ -2.01
SLX5P32828 PSD2YGR170W 3417 nt2.46□□□□□ -2.02
SLX5P32828 YDR098C-BYDR098C-B 5268 nt2.46□□□□□ -2.02
SLX5P32828 YDR210C-DYDR210C-D 5268 nt2.46□□□□□ -2.02
SLX5P32828 YDR316W-BYDR316W-B 5268 nt2.46□□□□□ -2.02
SLX5P32828 YDR365W-BYDR365W-B 5268 nt2.46□□□□□ -2.02
SLX5P32828 YER138CYER138C 5268 nt2.46□□□□□ -2.02
SLX5P32828 YER160CYER160C 5268 nt2.46□□□□□ -2.02
SLX5P32828 YGR038C-BYGR038C-B 5268 nt2.46□□□□□ -2.02
SLX5P32828 YGR161C-DYGR161C-D 5268 nt2.46□□□□□ -2.02
SLX5P32828 YJR027WYJR027W 5268 nt2.46□□□□□ -2.02
SLX5P32828 YLR157C-BYLR157C-B 5268 nt2.46□□□□□ -2.02
SLX5P32828 YML039WYML039W 5268 nt2.46□□□□□ -2.02
SLX5P32828 YML045WYML045W 5268 nt2.46□□□□□ -2.02
SLX5P32828 YMR050CYMR050C 5268 nt2.46□□□□□ -2.02
SLX5P32828 YOL103W-BYOL103W-B 5268 nt2.46□□□□□ -2.02
SLX5P32828 YBR012W-BYBR012W-B 5271 nt2.46□□□□□ -2.02
SLX5P32828 YOR142W-BYOR142W-B 5268 nt2.46□□□□□ -2.02
SLX5P32828 YPL257W-BYPL257W-B 5268 nt2.46□□□□□ -2.02
SLX5P32828 YPR158W-BYPR158W-B 5271 nt2.46□□□□□ -2.02
SLX5P32828 APL3YBL037W 3078 nt2.45□□□□□ -2.02
SLX5P32828 YNL054W-BYNL054W-B 5250 nt2.45□□□□□ -2.02
SLX5P32828 snR67snR67 82 nt2.44□□□□□ -2.02
SLX5P32828 UBR2YLR024C 5619 nt2.44□□□□□ -2.02
SLX5P32828 HER1YOR227W 3741 nt2.43□□□□□ -2.02
SLX5P32828 YOL098CYOL098C 3114 nt2.43□□□□□ -2.02
SLX5P32828 KRE33YNL132W 3171 nt2.42□□□□□ -2.02
SLX5P32828 MLP2YIL149C 5040 nt2.4□□□□□ -2.03
SLX5P32828 YLL006W-AYLL006W-A 177 nt2.4□□□□□ -2.03
SLX5P32828 NUP192YJL039C 5052 nt2.39□□□□□ -2.03
SLX5P32828 IRA2YOL081W 9240 nt2.37□□□□□ -2.03
SLX5P32828 SKI3YPR189W 4299 nt2.37□□□□□ -2.03
SLX5P32828 PDR11YIL013C 4236 nt2.36□□□□□ -2.03
SLX5P32828 REV3YPL167C 4515 nt2.34□□□□□ -2.03
SLX5P32828 VPS13YLL040C 9435 nt2.34□□□□□ -2.04
SLX5P32828 MYO4YAL029C 4416 nt2.33□□□□□ -2.04
SLX5P32828 YHR180W-AYHR180W-A 183 nt2.33□□□□□ -2.04
SLX5P32828 SWI4YER111C 3282 nt2.31□□□□□ -2.04
SLX5P32828 BPH1YCR032W 6504 nt2.31□□□□□ -2.04
SLX5P32828 NUP170YBL079W 4509 nt2.29□□□□□ -2.04
SLX5P32828 DNF1YER166W 4716 nt2.27□□□□□ -2.05
SLX5P32828 NEO1YIL048W 3456 nt2.27□□□□□ -2.05
SLX5P32828 NUP145YGL092W 3954 nt2.26□□□□□ -2.05
SLX5P32828 CLU1YMR012W 3834 nt2.26□□□□□ -2.05
SLX5P32828 YNL284C-BYNL284C-B 5268 nt2.26□□□□□ -2.05
SLX5P32828 INO80YGL150C 4470 nt2.25□□□□□ -2.05
SLX5P32828 BNI1YNL271C 5862 nt2.24□□□□□ -2.05
SLX5P32828 TRM732YMR259C 4263 nt2.22□□□□□ -2.05
SLX5P32828 snR77snR77 88 nt2.2□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms