Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CD40P25942 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.27■□□□□ 0.36
CD40P25942 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.27■□□□□ 0.36
CD40P25942 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CD40P25942 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CD40P25942 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.27■□□□□ 0.35
CD40P25942 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CD40P25942 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CD40P25942 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CD40P25942 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.27■□□□□ 0.35
CD40P25942 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CD40P25942 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CD40P25942 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD40P25942 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD40P25942 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.26■□□□□ 0.35
CD40P25942 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD40P25942 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CD40P25942 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.26■□□□□ 0.35
CD40P25942 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.26■□□□□ 0.35
CD40P25942 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD40P25942 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CD40P25942 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.26■□□□□ 0.35
CD40P25942 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD40P25942 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
CD40P25942 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD40P25942 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CD40P25942 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD40P25942 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD40P25942 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CD40P25942 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.25■□□□□ 0.35
CD40P25942 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD40P25942 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.25■□□□□ 0.35
CD40P25942 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD40P25942 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.25■□□□□ 0.35
CD40P25942 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CD40P25942 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CD40P25942 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.25■□□□□ 0.35
CD40P25942 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.25■□□□□ 0.35
CD40P25942 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.25■□□□□ 0.35
CD40P25942 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD40P25942 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD40P25942 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.24■□□□□ 0.35
CD40P25942 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CD40P25942 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD40P25942 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD40P25942 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD40P25942 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD40P25942 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CD40P25942 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.24■□□□□ 0.35
CD40P25942 AL596275.1-201ENST00000423464 877 ntBASIC17.24■□□□□ 0.35
CD40P25942 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CD40P25942 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.24■□□□□ 0.35
CD40P25942 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.24■□□□□ 0.35
CD40P25942 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.24■□□□□ 0.35
CD40P25942 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.24■□□□□ 0.35
CD40P25942 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.24■□□□□ 0.35
CD40P25942 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.24■□□□□ 0.35
CD40P25942 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.24■□□□□ 0.35
CD40P25942 Z99916.2-201ENST00000604037 246 ntBASIC17.24■□□□□ 0.35
CD40P25942 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD40P25942 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CD40P25942 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD40P25942 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD40P25942 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.23■□□□□ 0.35
CD40P25942 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD40P25942 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD40P25942 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.23■□□□□ 0.35
CD40P25942 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CD40P25942 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.23■□□□□ 0.35
CD40P25942 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CD40P25942 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.23■□□□□ 0.35
CD40P25942 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.23■□□□□ 0.35
CD40P25942 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.23■□□□□ 0.35
CD40P25942 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CD40P25942 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD40P25942 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.23■□□□□ 0.35
CD40P25942 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.23■□□□□ 0.35
CD40P25942 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD40P25942 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CD40P25942 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.23■□□□□ 0.35
CD40P25942 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
CD40P25942 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CD40P25942 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD40P25942 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.23■□□□□ 0.35
CD40P25942 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CD40P25942 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CD40P25942 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.22■□□□□ 0.35
CD40P25942 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CD40P25942 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD40P25942 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD40P25942 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD40P25942 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.22■□□□□ 0.35
CD40P25942 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CD40P25942 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CD40P25942 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
CD40P25942 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD40P25942 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.22■□□□□ 0.35
CD40P25942 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.22■□□□□ 0.35
CD40P25942 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.22■□□□□ 0.35
CD40P25942 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms