Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.51■□□□□ 0.71
CDH3P22223 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.51■□□□□ 0.71
CDH3P22223 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDH3P22223 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CDH3P22223 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.51■□□□□ 0.71
CDH3P22223 ITM2C-210ENST00000620962 501 ntBASIC19.51■□□□□ 0.71
CDH3P22223 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH3P22223 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH3P22223 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.51■□□□□ 0.71
CDH3P22223 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH3P22223 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.51■□□□□ 0.71
CDH3P22223 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.51■□□□□ 0.71
CDH3P22223 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH3P22223 KRT8P36-201ENST00000489121 1440 ntBASIC19.51■□□□□ 0.71
CDH3P22223 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH3P22223 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH3P22223 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH3P22223 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH3P22223 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH3P22223 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CDH3P22223 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.5■□□□□ 0.71
CDH3P22223 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDH3P22223 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.5■□□□□ 0.71
CDH3P22223 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.5■□□□□ 0.71
CDH3P22223 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.5■□□□□ 0.71
CDH3P22223 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDH3P22223 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH3P22223 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.5■□□□□ 0.71
CDH3P22223 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
CDH3P22223 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
CDH3P22223 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDH3P22223 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH3P22223 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH3P22223 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDH3P22223 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH3P22223 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.5■□□□□ 0.71
CDH3P22223 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.5■□□□□ 0.71
CDH3P22223 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.49■□□□□ 0.71
CDH3P22223 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH3P22223 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH3P22223 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDH3P22223 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH3P22223 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH3P22223 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.49■□□□□ 0.71
CDH3P22223 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.49■□□□□ 0.71
CDH3P22223 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDH3P22223 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.49■□□□□ 0.71
CDH3P22223 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH3P22223 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.49■□□□□ 0.71
CDH3P22223 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.49■□□□□ 0.71
CDH3P22223 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH3P22223 AC006058.3-201ENST00000606217 1069 ntBASIC19.49■□□□□ 0.71
CDH3P22223 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH3P22223 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH3P22223 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDH3P22223 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
CDH3P22223 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.49■□□□□ 0.71
CDH3P22223 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH3P22223 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.48■□□□□ 0.71
CDH3P22223 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH3P22223 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDH3P22223 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH3P22223 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH3P22223 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDH3P22223 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.48■□□□□ 0.71
CDH3P22223 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH3P22223 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH3P22223 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.48■□□□□ 0.71
CDH3P22223 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH3P22223 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH3P22223 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CDH3P22223 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.48■□□□□ 0.71
CDH3P22223 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
CDH3P22223 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.48■□□□□ 0.71
CDH3P22223 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH3P22223 SOX15-203ENST00000570788 1093 ntBASIC19.48■□□□□ 0.71
CDH3P22223 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.48■□□□□ 0.71
CDH3P22223 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH3P22223 AIRN-201ENST00000601203 4374 ntBASIC19.48■□□□□ 0.71
CDH3P22223 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH3P22223 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH3P22223 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH3P22223 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH3P22223 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.48■□□□□ 0.71
CDH3P22223 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.48■□□□□ 0.71
CDH3P22223 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.48■□□□□ 0.71
CDH3P22223 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.48■□□□□ 0.71
CDH3P22223 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH3P22223 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CDH3P22223 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDH3P22223 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.48■□□□□ 0.71
CDH3P22223 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.48■□□□□ 0.71
CDH3P22223 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.47■□□□□ 0.71
CDH3P22223 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDH3P22223 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH3P22223 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH3P22223 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CDH3P22223 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH3P22223 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDH3P22223 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms