Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
PRKCAP17252 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.46■□□□□ 0.55
PRKCAP17252 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
PRKCAP17252 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.46■□□□□ 0.55
PRKCAP17252 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
PRKCAP17252 GABARAPL3-202ENST00000624044 1851 ntBASIC18.46■□□□□ 0.54
PRKCAP17252 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRKCAP17252 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRKCAP17252 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRKCAP17252 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.45■□□□□ 0.54
PRKCAP17252 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.45■□□□□ 0.54
PRKCAP17252 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRKCAP17252 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRKCAP17252 AP005212.1-201ENST00000581547 1997 ntBASIC18.45■□□□□ 0.54
PRKCAP17252 GPX1P1-201ENST00000388829 606 ntBASIC18.45■□□□□ 0.54
PRKCAP17252 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRKCAP17252 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRKCAP17252 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.45■□□□□ 0.54
PRKCAP17252 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.45■□□□□ 0.54
PRKCAP17252 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.45■□□□□ 0.54
PRKCAP17252 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.45■□□□□ 0.54
PRKCAP17252 AC105020.6-201ENST00000621523 1217 ntBASIC18.45■□□□□ 0.54
PRKCAP17252 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRKCAP17252 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRKCAP17252 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PRKCAP17252 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRKCAP17252 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PRKCAP17252 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
PRKCAP17252 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PRKCAP17252 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PRKCAP17252 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRKCAP17252 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PRKCAP17252 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRKCAP17252 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PRKCAP17252 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRKCAP17252 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
PRKCAP17252 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PRKCAP17252 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PRKCAP17252 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.44■□□□□ 0.54
PRKCAP17252 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.44■□□□□ 0.54
PRKCAP17252 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRKCAP17252 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.44■□□□□ 0.54
PRKCAP17252 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.44■□□□□ 0.54
PRKCAP17252 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.44■□□□□ 0.54
PRKCAP17252 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRKCAP17252 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.44■□□□□ 0.54
PRKCAP17252 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRKCAP17252 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.44■□□□□ 0.54
PRKCAP17252 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PRKCAP17252 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRKCAP17252 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
PRKCAP17252 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRKCAP17252 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRKCAP17252 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
PRKCAP17252 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PRKCAP17252 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRKCAP17252 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PRKCAP17252 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
PRKCAP17252 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.43■□□□□ 0.54
PRKCAP17252 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRKCAP17252 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRKCAP17252 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRKCAP17252 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.43■□□□□ 0.54
PRKCAP17252 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PRKCAP17252 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PRKCAP17252 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PRKCAP17252 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRKCAP17252 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.43■□□□□ 0.54
PRKCAP17252 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PRKCAP17252 GUSBP6-202ENST00000438529 1198 ntBASIC18.43■□□□□ 0.54
PRKCAP17252 TSPY6P-201ENST00000448518 926 ntBASIC18.43■□□□□ 0.54
PRKCAP17252 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.43■□□□□ 0.54
PRKCAP17252 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
PRKCAP17252 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.43■□□□□ 0.54
PRKCAP17252 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PRKCAP17252 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.43■□□□□ 0.54
PRKCAP17252 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRKCAP17252 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.43■□□□□ 0.54
PRKCAP17252 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRKCAP17252 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRKCAP17252 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PRKCAP17252 AC092720.2-201ENST00000602388 1665 ntBASIC18.43■□□□□ 0.54
PRKCAP17252 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.43■□□□□ 0.54
PRKCAP17252 KRT17P1-201ENST00000399211 1546 ntBASIC18.43■□□□□ 0.54
PRKCAP17252 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PRKCAP17252 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRKCAP17252 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRKCAP17252 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PRKCAP17252 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
PRKCAP17252 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.42■□□□□ 0.54
PRKCAP17252 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRKCAP17252 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRKCAP17252 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.42■□□□□ 0.54
PRKCAP17252 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRKCAP17252 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRKCAP17252 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRKCAP17252 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PRKCAP17252 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PRKCAP17252 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.42■□□□□ 0.54
PRKCAP17252 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms