Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
PPP3CBP16298 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PPP3CBP16298 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PPP3CBP16298 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.87■□□□□ 0.45
PPP3CBP16298 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PPP3CBP16298 AC128676.1-201ENST00000454392 318 ntBASIC17.87■□□□□ 0.45
PPP3CBP16298 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PPP3CBP16298 PNMA6B-201ENST00000538162 1200 ntBASIC17.87■□□□□ 0.45
PPP3CBP16298 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
PPP3CBP16298 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PPP3CBP16298 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
PPP3CBP16298 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
PPP3CBP16298 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PPP3CBP16298 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PPP3CBP16298 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
PPP3CBP16298 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.87■□□□□ 0.45
PPP3CBP16298 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
PPP3CBP16298 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.87■□□□□ 0.45
PPP3CBP16298 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PPP3CBP16298 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PPP3CBP16298 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.86■□□□□ 0.45
PPP3CBP16298 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PPP3CBP16298 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PPP3CBP16298 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PPP3CBP16298 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PPP3CBP16298 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.86■□□□□ 0.45
PPP3CBP16298 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
PPP3CBP16298 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PPP3CBP16298 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PPP3CBP16298 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PPP3CBP16298 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PPP3CBP16298 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PPP3CBP16298 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
PPP3CBP16298 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.86■□□□□ 0.45
PPP3CBP16298 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.86■□□□□ 0.45
PPP3CBP16298 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.86■□□□□ 0.45
PPP3CBP16298 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.86■□□□□ 0.45
PPP3CBP16298 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PPP3CBP16298 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PPP3CBP16298 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PPP3CBP16298 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PPP3CBP16298 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PPP3CBP16298 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PPP3CBP16298 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PPP3CBP16298 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PPP3CBP16298 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PPP3CBP16298 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PPP3CBP16298 AC087289.5-201ENST00000586076 3175 ntBASIC17.85■□□□□ 0.45
PPP3CBP16298 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PPP3CBP16298 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PPP3CBP16298 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PPP3CBP16298 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PPP3CBP16298 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
PPP3CBP16298 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PPP3CBP16298 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PPP3CBP16298 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PPP3CBP16298 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PPP3CBP16298 C2orf69P4-201ENST00000565394 541 ntBASIC17.85■□□□□ 0.45
PPP3CBP16298 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.85■□□□□ 0.45
PPP3CBP16298 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.85■□□□□ 0.45
PPP3CBP16298 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.85■□□□□ 0.45
PPP3CBP16298 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.85■□□□□ 0.45
PPP3CBP16298 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PPP3CBP16298 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.85■□□□□ 0.45
PPP3CBP16298 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.84■□□□□ 0.45
PPP3CBP16298 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.84■□□□□ 0.45
PPP3CBP16298 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
PPP3CBP16298 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PPP3CBP16298 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PPP3CBP16298 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PPP3CBP16298 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PPP3CBP16298 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.84■□□□□ 0.45
PPP3CBP16298 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PPP3CBP16298 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PPP3CBP16298 KRT17P3-201ENST00000420566 1262 ntBASIC17.84■□□□□ 0.45
PPP3CBP16298 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PPP3CBP16298 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.84■□□□□ 0.45
PPP3CBP16298 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.84■□□□□ 0.45
PPP3CBP16298 UNC93B4-201ENST00000505679 747 ntBASIC17.84■□□□□ 0.45
PPP3CBP16298 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.84■□□□□ 0.45
PPP3CBP16298 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PPP3CBP16298 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.84■□□□□ 0.45
PPP3CBP16298 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.84■□□□□ 0.45
PPP3CBP16298 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.84■□□□□ 0.45
PPP3CBP16298 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PPP3CBP16298 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.84■□□□□ 0.45
PPP3CBP16298 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PPP3CBP16298 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PPP3CBP16298 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
PPP3CBP16298 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PPP3CBP16298 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PPP3CBP16298 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PPP3CBP16298 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PPP3CBP16298 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PPP3CBP16298 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PPP3CBP16298 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PPP3CBP16298 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PPP3CBP16298 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PPP3CBP16298 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PPP3CBP16298 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms