Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
UBL4AP11441 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.45■□□□□ 0.54
UBL4AP11441 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.45■□□□□ 0.54
UBL4AP11441 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
UBL4AP11441 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.45■□□□□ 0.54
UBL4AP11441 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.45■□□□□ 0.54
UBL4AP11441 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.45■□□□□ 0.54
UBL4AP11441 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.45■□□□□ 0.54
UBL4AP11441 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.45■□□□□ 0.54
UBL4AP11441 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
UBL4AP11441 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.45■□□□□ 0.54
UBL4AP11441 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.45■□□□□ 0.54
UBL4AP11441 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.45■□□□□ 0.54
UBL4AP11441 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.45■□□□□ 0.54
UBL4AP11441 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBL4AP11441 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBL4AP11441 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
UBL4AP11441 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
UBL4AP11441 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.45■□□□□ 0.54
UBL4AP11441 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBL4AP11441 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBL4AP11441 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
UBL4AP11441 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBL4AP11441 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBL4AP11441 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.44■□□□□ 0.54
UBL4AP11441 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UBL4AP11441 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBL4AP11441 SLC29A4P1-201ENST00000398760 971 ntBASIC18.44■□□□□ 0.54
UBL4AP11441 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.44■□□□□ 0.54
UBL4AP11441 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.44■□□□□ 0.54
UBL4AP11441 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.44■□□□□ 0.54
UBL4AP11441 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.44■□□□□ 0.54
UBL4AP11441 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.44■□□□□ 0.54
UBL4AP11441 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UBL4AP11441 AC099778.1-201ENST00000568593 1911 ntBASIC18.44■□□□□ 0.54
UBL4AP11441 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBL4AP11441 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.44■□□□□ 0.54
UBL4AP11441 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.44■□□□□ 0.54
UBL4AP11441 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBL4AP11441 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.44■□□□□ 0.54
UBL4AP11441 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBL4AP11441 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.44■□□□□ 0.54
UBL4AP11441 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.44■□□□□ 0.54
UBL4AP11441 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.43■□□□□ 0.54
UBL4AP11441 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBL4AP11441 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
UBL4AP11441 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBL4AP11441 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBL4AP11441 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBL4AP11441 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBL4AP11441 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBL4AP11441 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBL4AP11441 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBL4AP11441 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBL4AP11441 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBL4AP11441 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBL4AP11441 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBL4AP11441 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBL4AP11441 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
UBL4AP11441 GPX1P1-201ENST00000388829 606 ntBASIC18.43■□□□□ 0.54
UBL4AP11441 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.43■□□□□ 0.54
UBL4AP11441 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
UBL4AP11441 NCF1B-203ENST00000435988 1254 ntBASIC18.43■□□□□ 0.54
UBL4AP11441 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
UBL4AP11441 C2orf69P4-201ENST00000565394 541 ntBASIC18.43■□□□□ 0.54
UBL4AP11441 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBL4AP11441 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.43■□□□□ 0.54
UBL4AP11441 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBL4AP11441 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
UBL4AP11441 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBL4AP11441 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
UBL4AP11441 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBL4AP11441 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBL4AP11441 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBL4AP11441 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBL4AP11441 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBL4AP11441 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBL4AP11441 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBL4AP11441 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
UBL4AP11441 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
UBL4AP11441 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.42■□□□□ 0.54
UBL4AP11441 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.42■□□□□ 0.54
UBL4AP11441 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
UBL4AP11441 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
UBL4AP11441 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
UBL4AP11441 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.42■□□□□ 0.54
UBL4AP11441 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBL4AP11441 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBL4AP11441 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
UBL4AP11441 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.42■□□□□ 0.54
UBL4AP11441 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
UBL4AP11441 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.42■□□□□ 0.54
UBL4AP11441 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.41■□□□□ 0.54
UBL4AP11441 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UBL4AP11441 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.41■□□□□ 0.54
UBL4AP11441 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBL4AP11441 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBL4AP11441 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBL4AP11441 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
UBL4AP11441 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms