Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RARAP10276 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RARAP10276 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
RARAP10276 RAP2CP1-201ENST00000605103 478 ntBASIC20.98■□□□□ 0.95
RARAP10276 AL050303.2-201ENST00000619798 666 ntBASIC20.98■□□□□ 0.95
RARAP10276 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RARAP10276 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.98■□□□□ 0.95
RARAP10276 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.98■□□□□ 0.95
RARAP10276 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RARAP10276 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RARAP10276 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RARAP10276 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RARAP10276 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RARAP10276 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RARAP10276 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RARAP10276 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
RARAP10276 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RARAP10276 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RARAP10276 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RARAP10276 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
RARAP10276 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RARAP10276 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RARAP10276 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.97■□□□□ 0.95
RARAP10276 AL512625.2-201ENST00000417533 625 ntBASIC20.97■□□□□ 0.95
RARAP10276 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.97■□□□□ 0.95
RARAP10276 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.97■□□□□ 0.95
RARAP10276 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.97■□□□□ 0.95
RARAP10276 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RARAP10276 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RARAP10276 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RARAP10276 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RARAP10276 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RARAP10276 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.97■□□□□ 0.95
RARAP10276 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RARAP10276 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RARAP10276 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.96■□□□□ 0.95
RARAP10276 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RARAP10276 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RARAP10276 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
RARAP10276 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
RARAP10276 AC087289.5-201ENST00000586076 3175 ntBASIC20.96■□□□□ 0.95
RARAP10276 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RARAP10276 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RARAP10276 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RARAP10276 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RARAP10276 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RARAP10276 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RARAP10276 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RARAP10276 AC026185.1-201ENST00000445748 174 ntBASIC20.96■□□□□ 0.95
RARAP10276 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.96■□□□□ 0.95
RARAP10276 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RARAP10276 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RARAP10276 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RARAP10276 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RARAP10276 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RARAP10276 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RARAP10276 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
RARAP10276 BX119927.1-201ENST00000636596 1552 ntBASIC20.95■□□□□ 0.94
RARAP10276 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RARAP10276 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.95■□□□□ 0.94
RARAP10276 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
RARAP10276 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.95■□□□□ 0.94
RARAP10276 AC133552.2-202ENST00000575694 574 ntBASIC20.95■□□□□ 0.94
RARAP10276 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
RARAP10276 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.95■□□□□ 0.94
RARAP10276 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.95■□□□□ 0.94
RARAP10276 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
RARAP10276 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
RARAP10276 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RARAP10276 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
RARAP10276 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
RARAP10276 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RARAP10276 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RARAP10276 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RARAP10276 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RARAP10276 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RARAP10276 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RARAP10276 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RARAP10276 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.94■□□□□ 0.94
RARAP10276 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RARAP10276 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RARAP10276 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RARAP10276 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.94■□□□□ 0.94
RARAP10276 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.94■□□□□ 0.94
RARAP10276 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RARAP10276 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RARAP10276 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.94■□□□□ 0.94
RARAP10276 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RARAP10276 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RARAP10276 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
RARAP10276 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
RARAP10276 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
RARAP10276 KRT17P1-201ENST00000399211 1546 ntBASIC20.94■□□□□ 0.94
RARAP10276 PTBP1P-201ENST00000554374 1601 ntBASIC20.93■□□□□ 0.94
RARAP10276 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RARAP10276 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.93■□□□□ 0.94
RARAP10276 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
RARAP10276 CROCCP5-201ENST00000436658 830 ntBASIC20.93■□□□□ 0.94
RARAP10276 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RARAP10276 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms