Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DPB1P04440 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.92■□□□□ 0.46
HLA-DPB1P04440 AC138907.5-202ENST00000569484 235 ntBASIC17.92■□□□□ 0.46
HLA-DPB1P04440 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
HLA-DPB1P04440 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
HLA-DPB1P04440 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DPB1P04440 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HLA-DPB1P04440 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DPB1P04440 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DPB1P04440 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.92■□□□□ 0.46
HLA-DPB1P04440 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DPB1P04440 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
HLA-DPB1P04440 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.92■□□□□ 0.46
HLA-DPB1P04440 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DPB1P04440 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.92■□□□□ 0.46
HLA-DPB1P04440 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DPB1P04440 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DPB1P04440 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HLA-DPB1P04440 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
HLA-DPB1P04440 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.91■□□□□ 0.46
HLA-DPB1P04440 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
HLA-DPB1P04440 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DPB1P04440 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DPB1P04440 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.91■□□□□ 0.46
HLA-DPB1P04440 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DPB1P04440 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.91■□□□□ 0.46
HLA-DPB1P04440 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
HLA-DPB1P04440 KRT18P5-201ENST00000436075 1291 ntBASIC17.91■□□□□ 0.46
HLA-DPB1P04440 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DPB1P04440 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DPB1P04440 AP001160.3-201ENST00000601484 763 ntBASIC17.91■□□□□ 0.46
HLA-DPB1P04440 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
HLA-DPB1P04440 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DPB1P04440 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DPB1P04440 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
HLA-DPB1P04440 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DPB1P04440 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
HLA-DPB1P04440 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DPB1P04440 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DPB1P04440 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.91■□□□□ 0.46
HLA-DPB1P04440 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DPB1P04440 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
HLA-DPB1P04440 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DPB1P04440 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
HLA-DPB1P04440 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.9■□□□□ 0.46
HLA-DPB1P04440 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HLA-DPB1P04440 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DPB1P04440 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
HLA-DPB1P04440 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DPB1P04440 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DPB1P04440 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
HLA-DPB1P04440 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DPB1P04440 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DPB1P04440 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HLA-DPB1P04440 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DPB1P04440 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DPB1P04440 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
HLA-DPB1P04440 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DPB1P04440 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DPB1P04440 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.9■□□□□ 0.46
HLA-DPB1P04440 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DPB1P04440 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.9■□□□□ 0.46
HLA-DPB1P04440 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.9■□□□□ 0.46
HLA-DPB1P04440 AL162430.1-201ENST00000480705 870 ntBASIC17.9■□□□□ 0.46
HLA-DPB1P04440 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.9■□□□□ 0.46
HLA-DPB1P04440 AC008175.2-201ENST00000612840 297 ntBASIC17.9■□□□□ 0.46
HLA-DPB1P04440 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DPB1P04440 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DPB1P04440 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DPB1P04440 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DPB1P04440 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DPB1P04440 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.9■□□□□ 0.46
HLA-DPB1P04440 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
HLA-DPB1P04440 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
HLA-DPB1P04440 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HLA-DPB1P04440 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HLA-DPB1P04440 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DPB1P04440 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.89■□□□□ 0.45
HLA-DPB1P04440 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.89■□□□□ 0.45
HLA-DPB1P04440 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DPB1P04440 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DPB1P04440 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.89■□□□□ 0.45
HLA-DPB1P04440 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DPB1P04440 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.89■□□□□ 0.45
HLA-DPB1P04440 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DPB1P04440 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DPB1P04440 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DPB1P04440 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DPB1P04440 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
HLA-DPB1P04440 KRT19P1-201ENST00000405746 1186 ntBASIC17.89■□□□□ 0.45
HLA-DPB1P04440 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.89■□□□□ 0.45
HLA-DPB1P04440 AC010141.2-201ENST00000452426 721 ntBASIC17.89■□□□□ 0.45
HLA-DPB1P04440 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DPB1P04440 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DPB1P04440 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DPB1P04440 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.89■□□□□ 0.45
HLA-DPB1P04440 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DPB1P04440 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DPB1P04440 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.89■□□□□ 0.45
HLA-DPB1P04440 AC120498.9-201ENST00000339021 3867 ntBASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms