Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDGFAP04085 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PDGFAP04085 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDGFAP04085 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.68■□□□□ 0.58
PDGFAP04085 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.68■□□□□ 0.58
PDGFAP04085 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.68■□□□□ 0.58
PDGFAP04085 RARRES2P10-201ENST00000564312 460 ntBASIC18.68■□□□□ 0.58
PDGFAP04085 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.68■□□□□ 0.58
PDGFAP04085 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDGFAP04085 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.68■□□□□ 0.58
PDGFAP04085 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.68■□□□□ 0.58
PDGFAP04085 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.68■□□□□ 0.58
PDGFAP04085 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDGFAP04085 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDGFAP04085 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PDGFAP04085 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDGFAP04085 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PDGFAP04085 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PDGFAP04085 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.68■□□□□ 0.58
PDGFAP04085 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDGFAP04085 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.67■□□□□ 0.58
PDGFAP04085 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDGFAP04085 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PDGFAP04085 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDGFAP04085 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDGFAP04085 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.67■□□□□ 0.58
PDGFAP04085 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDGFAP04085 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDGFAP04085 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PDGFAP04085 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDGFAP04085 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.67■□□□□ 0.58
PDGFAP04085 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDGFAP04085 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDGFAP04085 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.67■□□□□ 0.58
PDGFAP04085 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
PDGFAP04085 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.67■□□□□ 0.58
PDGFAP04085 AL356652.1-201ENST00000615962 565 ntBASIC18.67■□□□□ 0.58
PDGFAP04085 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.67■□□□□ 0.58
PDGFAP04085 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDGFAP04085 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDGFAP04085 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDGFAP04085 AC242852.2-201ENST00000615738 1807 ntBASIC18.67■□□□□ 0.58
PDGFAP04085 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDGFAP04085 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDGFAP04085 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDGFAP04085 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDGFAP04085 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.67■□□□□ 0.58
PDGFAP04085 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDGFAP04085 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDGFAP04085 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDGFAP04085 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDGFAP04085 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDGFAP04085 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDGFAP04085 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.66■□□□□ 0.58
PDGFAP04085 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.66■□□□□ 0.58
PDGFAP04085 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDGFAP04085 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDGFAP04085 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDGFAP04085 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.66■□□□□ 0.58
PDGFAP04085 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PDGFAP04085 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.66■□□□□ 0.58
PDGFAP04085 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDGFAP04085 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDGFAP04085 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.66■□□□□ 0.58
PDGFAP04085 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.66■□□□□ 0.58
PDGFAP04085 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDGFAP04085 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.66■□□□□ 0.58
PDGFAP04085 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.66■□□□□ 0.58
PDGFAP04085 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDGFAP04085 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.66■□□□□ 0.58
PDGFAP04085 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
PDGFAP04085 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDGFAP04085 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
PDGFAP04085 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PDGFAP04085 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDGFAP04085 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDGFAP04085 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.65■□□□□ 0.58
PDGFAP04085 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.65■□□□□ 0.58
PDGFAP04085 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PDGFAP04085 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.65■□□□□ 0.58
PDGFAP04085 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PDGFAP04085 AL353708.3-201ENST00000610272 989 ntBASIC18.65■□□□□ 0.58
PDGFAP04085 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDGFAP04085 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDGFAP04085 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDGFAP04085 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDGFAP04085 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.65■□□□□ 0.58
PDGFAP04085 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PDGFAP04085 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
PDGFAP04085 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDGFAP04085 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDGFAP04085 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDGFAP04085 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.64■□□□□ 0.58
PDGFAP04085 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.64■□□□□ 0.58
PDGFAP04085 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PDGFAP04085 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PDGFAP04085 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDGFAP04085 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
PDGFAP04085 AL390719.1-204ENST00000412397 1219 ntBASIC18.64■□□□□ 0.57
PDGFAP04085 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms