Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
MT-ND3P03897 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.29■□□□□ 0.84
MT-ND3P03897 NCF1B-203ENST00000435988 1254 ntBASIC20.29■□□□□ 0.84
MT-ND3P03897 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.29■□□□□ 0.84
MT-ND3P03897 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MT-ND3P03897 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.29■□□□□ 0.84
MT-ND3P03897 MFSD11-216ENST00000590393 1141 ntBASIC20.29■□□□□ 0.84
MT-ND3P03897 AP001160.3-201ENST00000601484 763 ntBASIC20.29■□□□□ 0.84
MT-ND3P03897 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.29■□□□□ 0.84
MT-ND3P03897 AC104771.1-201ENST00000603335 964 ntBASIC20.29■□□□□ 0.84
MT-ND3P03897 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
MT-ND3P03897 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
MT-ND3P03897 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.29■□□□□ 0.84
MT-ND3P03897 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
MT-ND3P03897 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MT-ND3P03897 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
MT-ND3P03897 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
MT-ND3P03897 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
MT-ND3P03897 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
MT-ND3P03897 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
MT-ND3P03897 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MT-ND3P03897 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
MT-ND3P03897 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MT-ND3P03897 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
MT-ND3P03897 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MT-ND3P03897 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MT-ND3P03897 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MT-ND3P03897 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MT-ND3P03897 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.28■□□□□ 0.84
MT-ND3P03897 MIR663A-201ENST00000385250 93 ntBASIC20.28■□□□□ 0.84
MT-ND3P03897 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.28■□□□□ 0.84
MT-ND3P03897 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.28■□□□□ 0.84
MT-ND3P03897 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.28■□□□□ 0.84
MT-ND3P03897 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.28■□□□□ 0.84
MT-ND3P03897 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.28■□□□□ 0.84
MT-ND3P03897 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
MT-ND3P03897 KRT18P20-201ENST00000548986 1279 ntBASIC20.28■□□□□ 0.84
MT-ND3P03897 AL109923.1-201ENST00000618799 583 ntBASIC20.28■□□□□ 0.84
MT-ND3P03897 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
MT-ND3P03897 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MT-ND3P03897 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
MT-ND3P03897 BX323043.1-201ENST00000641006 1765 ntBASIC20.28■□□□□ 0.84
MT-ND3P03897 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
MT-ND3P03897 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.28■□□□□ 0.84
MT-ND3P03897 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.28■□□□□ 0.84
MT-ND3P03897 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MT-ND3P03897 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MT-ND3P03897 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
MT-ND3P03897 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MT-ND3P03897 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.27■□□□□ 0.84
MT-ND3P03897 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MT-ND3P03897 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
MT-ND3P03897 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
MT-ND3P03897 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MT-ND3P03897 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
MT-ND3P03897 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MT-ND3P03897 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.27■□□□□ 0.84
MT-ND3P03897 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.27■□□□□ 0.84
MT-ND3P03897 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MT-ND3P03897 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MT-ND3P03897 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.27■□□□□ 0.84
MT-ND3P03897 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.27■□□□□ 0.84
MT-ND3P03897 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
MT-ND3P03897 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MT-ND3P03897 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MT-ND3P03897 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
MT-ND3P03897 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
MT-ND3P03897 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MT-ND3P03897 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MT-ND3P03897 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
MT-ND3P03897 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.27■□□□□ 0.84
MT-ND3P03897 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.27■□□□□ 0.83
MT-ND3P03897 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.27■□□□□ 0.83
MT-ND3P03897 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.26■□□□□ 0.83
MT-ND3P03897 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MT-ND3P03897 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.26■□□□□ 0.83
MT-ND3P03897 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MT-ND3P03897 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MT-ND3P03897 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.26■□□□□ 0.83
MT-ND3P03897 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
MT-ND3P03897 GPX1P1-201ENST00000388829 606 ntBASIC20.26■□□□□ 0.83
MT-ND3P03897 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.26■□□□□ 0.83
MT-ND3P03897 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.26■□□□□ 0.83
MT-ND3P03897 UBE2DNL-204ENST00000602536 740 ntBASIC20.26■□□□□ 0.83
MT-ND3P03897 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MT-ND3P03897 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.26■□□□□ 0.83
MT-ND3P03897 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MT-ND3P03897 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.26■□□□□ 0.83
MT-ND3P03897 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MT-ND3P03897 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MT-ND3P03897 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.26■□□□□ 0.83
MT-ND3P03897 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
MT-ND3P03897 AL020996.1-203ENST00000536896 2307 ntBASIC20.26■□□□□ 0.83
MT-ND3P03897 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
MT-ND3P03897 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MT-ND3P03897 DPP3P2-201ENST00000416030 1696 ntBASIC20.26■□□□□ 0.83
MT-ND3P03897 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MT-ND3P03897 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MT-ND3P03897 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MT-ND3P03897 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms