Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.03■□□□□ -0
HLA-DQA1P01909 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DQA1P01909 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DQA1P01909 LSM4-201ENST00000252816 986 ntTSL 2 BASIC15.03■□□□□ -0
HLA-DQA1P01909 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DQA1P01909 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DQA1P01909 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DQA1P01909 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC15.03■□□□□ -0
HLA-DQA1P01909 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC15.03■□□□□ -0
HLA-DQA1P01909 MIR6724-1-201ENST00000616420 92 ntBASIC15.03■□□□□ -0
HLA-DQA1P01909 MIR6724-2-201ENST00000616483 92 ntBASIC15.03■□□□□ -0
HLA-DQA1P01909 MIR6724-4-201ENST00000617390 92 ntBASIC15.03■□□□□ -0
HLA-DQA1P01909 MIR6724-3-201ENST00000622482 92 ntBASIC15.03■□□□□ -0
HLA-DQA1P01909 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC15.03■□□□□ -0
HLA-DQA1P01909 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
HLA-DQA1P01909 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DQA1P01909 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
HLA-DQA1P01909 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DQA1P01909 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
HLA-DQA1P01909 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC15.02■□□□□ -0
HLA-DQA1P01909 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC15.02■□□□□ -0
HLA-DQA1P01909 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DQA1P01909 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DQA1P01909 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DQA1P01909 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DQA1P01909 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
HLA-DQA1P01909 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
HLA-DQA1P01909 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DQA1P01909 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.02■□□□□ -0
HLA-DQA1P01909 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
HLA-DQA1P01909 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC15.02■□□□□ -0
HLA-DQA1P01909 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC15.02■□□□□ -0
HLA-DQA1P01909 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
HLA-DQA1P01909 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DQA1P01909 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DQA1P01909 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DQA1P01909 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
HLA-DQA1P01909 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DQA1P01909 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
HLA-DQA1P01909 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DQA1P01909 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
HLA-DQA1P01909 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DQA1P01909 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DQA1P01909 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DQA1P01909 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DQA1P01909 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
HLA-DQA1P01909 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DQA1P01909 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC15.02□□□□□ -0.01
HLA-DQA1P01909 OR6D1P-202ENST00000641007 5290 ntBASIC15.01□□□□□ -0.01
HLA-DQA1P01909 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
HLA-DQA1P01909 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.01□□□□□ -0.01
HLA-DQA1P01909 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HLA-DQA1P01909 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA1P01909 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA1P01909 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC15.01□□□□□ -0.01
HLA-DQA1P01909 STAC-204ENST00000457375 1366 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-DQA1P01909 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA1P01909 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA1P01909 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA1P01909 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC15.01□□□□□ -0.01
HLA-DQA1P01909 EXOC3-AS1-202ENST00000623673 1663 ntBASIC15.01□□□□□ -0.01
HLA-DQA1P01909 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA1P01909 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
HLA-DQA1P01909 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA1P01909 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
HLA-DQA1P01909 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-DQA1P01909 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC15.01□□□□□ -0.01
HLA-DQA1P01909 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA1P01909 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA1P01909 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
HLA-DQA1P01909 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-DQA1P01909 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA1P01909 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA1P01909 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
HLA-DQA1P01909 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA1P01909 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA1P01909 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA1P01909 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-DQA1P01909 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA1P01909 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-DQA1P01909 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA1P01909 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-DQA1P01909 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HLA-DQA1P01909 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA1P01909 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQA1P01909 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC15□□□□□ -0.01
HLA-DQA1P01909 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HLA-DQA1P01909 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA1P01909 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA1P01909 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
HLA-DQA1P01909 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
HLA-DQA1P01909 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA1P01909 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC15□□□□□ -0.01
HLA-DQA1P01909 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA1P01909 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA1P01909 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC15□□□□□ -0.01
HLA-DQA1P01909 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA1P01909 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC15□□□□□ -0.01
HLA-DQA1P01909 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-DQA1P01909 BX005040.4-201ENST00000637145 1518 ntBASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms