Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TRBC1P01850 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TRBC1P01850 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBC1P01850 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBC1P01850 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBC1P01850 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.04■□□□□ 0.8
TRBC1P01850 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBC1P01850 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TRBC1P01850 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBC1P01850 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBC1P01850 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
TRBC1P01850 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRBC1P01850 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBC1P01850 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBC1P01850 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.04■□□□□ 0.8
TRBC1P01850 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TRBC1P01850 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.04■□□□□ 0.8
TRBC1P01850 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.04■□□□□ 0.8
TRBC1P01850 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRBC1P01850 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.04■□□□□ 0.8
TRBC1P01850 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.04■□□□□ 0.8
TRBC1P01850 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRBC1P01850 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.04■□□□□ 0.8
TRBC1P01850 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBC1P01850 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBC1P01850 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBC1P01850 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBC1P01850 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBC1P01850 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TRBC1P01850 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
TRBC1P01850 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.03■□□□□ 0.8
TRBC1P01850 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRBC1P01850 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRBC1P01850 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRBC1P01850 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.03■□□□□ 0.8
TRBC1P01850 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRBC1P01850 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRBC1P01850 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.03■□□□□ 0.8
TRBC1P01850 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.03■□□□□ 0.8
TRBC1P01850 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRBC1P01850 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.03■□□□□ 0.8
TRBC1P01850 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRBC1P01850 TSPY20P-201ENST00000450910 630 ntBASIC20.03■□□□□ 0.8
TRBC1P01850 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.03■□□□□ 0.8
TRBC1P01850 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.03■□□□□ 0.8
TRBC1P01850 AC120498.8-201ENST00000614275 531 ntBASIC20.03■□□□□ 0.8
TRBC1P01850 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.03■□□□□ 0.8
TRBC1P01850 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRBC1P01850 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRBC1P01850 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
TRBC1P01850 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRBC1P01850 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRBC1P01850 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
TRBC1P01850 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRBC1P01850 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
TRBC1P01850 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRBC1P01850 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRBC1P01850 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRBC1P01850 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRBC1P01850 KRT16P6-202ENST00000425692 1426 ntBASIC20.02■□□□□ 0.8
TRBC1P01850 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRBC1P01850 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRBC1P01850 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRBC1P01850 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRBC1P01850 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRBC1P01850 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRBC1P01850 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRBC1P01850 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TRBC1P01850 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRBC1P01850 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TRBC1P01850 POU5F1P3-201ENST00000428824 1078 ntBASIC20.02■□□□□ 0.8
TRBC1P01850 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.02■□□□□ 0.8
TRBC1P01850 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRBC1P01850 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
TRBC1P01850 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRBC1P01850 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRBC1P01850 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRBC1P01850 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
TRBC1P01850 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRBC1P01850 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.02■□□□□ 0.79
TRBC1P01850 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRBC1P01850 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
TRBC1P01850 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
TRBC1P01850 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRBC1P01850 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.01■□□□□ 0.79
TRBC1P01850 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.01■□□□□ 0.79
TRBC1P01850 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
TRBC1P01850 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
TRBC1P01850 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRBC1P01850 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.01■□□□□ 0.79
TRBC1P01850 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.01■□□□□ 0.79
TRBC1P01850 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.01■□□□□ 0.79
TRBC1P01850 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRBC1P01850 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRBC1P01850 AC099778.1-201ENST00000568593 1911 ntBASIC20.01■□□□□ 0.79
TRBC1P01850 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRBC1P01850 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRBC1P01850 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.01■□□□□ 0.79
TRBC1P01850 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TRBC1P01850 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms