Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.47■□□□□ 0.87
MT-CO1P00395 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
MT-CO1P00395 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MT-CO1P00395 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MT-CO1P00395 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
MT-CO1P00395 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.47■□□□□ 0.87
MT-CO1P00395 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
MT-CO1P00395 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.47■□□□□ 0.87
MT-CO1P00395 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
MT-CO1P00395 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
MT-CO1P00395 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
MT-CO1P00395 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MT-CO1P00395 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.46■□□□□ 0.87
MT-CO1P00395 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MT-CO1P00395 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MT-CO1P00395 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MT-CO1P00395 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.46■□□□□ 0.87
MT-CO1P00395 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
MT-CO1P00395 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MT-CO1P00395 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MT-CO1P00395 AC098590.1-201ENST00000468126 897 ntBASIC20.46■□□□□ 0.87
MT-CO1P00395 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MT-CO1P00395 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.46■□□□□ 0.87
MT-CO1P00395 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.46■□□□□ 0.87
MT-CO1P00395 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.46■□□□□ 0.87
MT-CO1P00395 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.46■□□□□ 0.87
MT-CO1P00395 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MT-CO1P00395 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.46■□□□□ 0.87
MT-CO1P00395 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.46■□□□□ 0.87
MT-CO1P00395 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.46■□□□□ 0.87
MT-CO1P00395 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MT-CO1P00395 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
MT-CO1P00395 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MT-CO1P00395 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MT-CO1P00395 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.45■□□□□ 0.86
MT-CO1P00395 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MT-CO1P00395 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MT-CO1P00395 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.45■□□□□ 0.86
MT-CO1P00395 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.45■□□□□ 0.86
MT-CO1P00395 AL390719.1-204ENST00000412397 1219 ntBASIC20.45■□□□□ 0.86
MT-CO1P00395 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
MT-CO1P00395 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.45■□□□□ 0.86
MT-CO1P00395 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.45■□□□□ 0.86
MT-CO1P00395 AC023632.3-201ENST00000521633 145 ntBASIC20.45■□□□□ 0.86
MT-CO1P00395 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MT-CO1P00395 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.45■□□□□ 0.86
MT-CO1P00395 AC120498.8-201ENST00000614275 531 ntBASIC20.45■□□□□ 0.86
MT-CO1P00395 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.45■□□□□ 0.86
MT-CO1P00395 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.45■□□□□ 0.86
MT-CO1P00395 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.45■□□□□ 0.86
MT-CO1P00395 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MT-CO1P00395 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MT-CO1P00395 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
MT-CO1P00395 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
MT-CO1P00395 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
MT-CO1P00395 DPP3P2-201ENST00000416030 1696 ntBASIC20.45■□□□□ 0.86
MT-CO1P00395 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
MT-CO1P00395 AC092720.2-201ENST00000602388 1665 ntBASIC20.45■□□□□ 0.86
MT-CO1P00395 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MT-CO1P00395 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
MT-CO1P00395 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
MT-CO1P00395 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.44■□□□□ 0.86
MT-CO1P00395 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MT-CO1P00395 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
MT-CO1P00395 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
MT-CO1P00395 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MT-CO1P00395 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MT-CO1P00395 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MT-CO1P00395 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
MT-CO1P00395 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
MT-CO1P00395 POM121L13P-201ENST00000422362 380 ntBASIC20.44■□□□□ 0.86
MT-CO1P00395 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
MT-CO1P00395 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
MT-CO1P00395 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
MT-CO1P00395 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MT-CO1P00395 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.44■□□□□ 0.86
MT-CO1P00395 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MT-CO1P00395 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
MT-CO1P00395 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MT-CO1P00395 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
MT-CO1P00395 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
MT-CO1P00395 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MT-CO1P00395 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MT-CO1P00395 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MT-CO1P00395 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
MT-CO1P00395 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MT-CO1P00395 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MT-CO1P00395 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MT-CO1P00395 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.43■□□□□ 0.86
MT-CO1P00395 KRT17P3-201ENST00000420566 1262 ntBASIC20.43■□□□□ 0.86
MT-CO1P00395 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
MT-CO1P00395 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.43■□□□□ 0.86
MT-CO1P00395 AC092667.1-201ENST00000434301 2586 ntBASIC20.43■□□□□ 0.86
MT-CO1P00395 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MT-CO1P00395 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MT-CO1P00395 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.43■□□□□ 0.86
MT-CO1P00395 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
MT-CO1P00395 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MT-CO1P00395 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MT-CO1P00395 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms