Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.72■□□□□ 0.59
SNX4O95219 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.72■□□□□ 0.59
SNX4O95219 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SNX4O95219 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SNX4O95219 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.72■□□□□ 0.59
SNX4O95219 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNX4O95219 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SNX4O95219 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNX4O95219 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
SNX4O95219 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SNX4O95219 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.71■□□□□ 0.59
SNX4O95219 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.71■□□□□ 0.59
SNX4O95219 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX4O95219 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX4O95219 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.71■□□□□ 0.59
SNX4O95219 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX4O95219 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.71■□□□□ 0.59
SNX4O95219 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SNX4O95219 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.71■□□□□ 0.59
SNX4O95219 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.71■□□□□ 0.59
SNX4O95219 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SNX4O95219 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.71■□□□□ 0.59
SNX4O95219 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.71■□□□□ 0.59
SNX4O95219 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.71■□□□□ 0.59
SNX4O95219 AC097658.1-201ENST00000475555 843 ntBASIC18.71■□□□□ 0.59
SNX4O95219 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
SNX4O95219 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SNX4O95219 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX4O95219 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX4O95219 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX4O95219 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX4O95219 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX4O95219 AC018445.3-201ENST00000624177 1945 ntBASIC18.7■□□□□ 0.58
SNX4O95219 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SNX4O95219 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SNX4O95219 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX4O95219 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX4O95219 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX4O95219 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SNX4O95219 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX4O95219 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX4O95219 AIRN-201ENST00000601203 4374 ntBASIC18.7■□□□□ 0.58
SNX4O95219 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.7■□□□□ 0.58
SNX4O95219 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX4O95219 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX4O95219 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SNX4O95219 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX4O95219 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX4O95219 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.7■□□□□ 0.58
SNX4O95219 AC087633.2-202ENST00000565166 1439 ntBASIC18.7■□□□□ 0.58
SNX4O95219 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.7■□□□□ 0.58
SNX4O95219 SMG8-203ENST00000578922 2178 ntBASIC18.7■□□□□ 0.58
SNX4O95219 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.7■□□□□ 0.58
SNX4O95219 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SNX4O95219 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SNX4O95219 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SNX4O95219 AC121338.2-201ENST00000622535 1744 ntBASIC18.7■□□□□ 0.58
SNX4O95219 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.7■□□□□ 0.58
SNX4O95219 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX4O95219 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.7■□□□□ 0.58
SNX4O95219 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SNX4O95219 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX4O95219 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX4O95219 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX4O95219 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX4O95219 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
SNX4O95219 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX4O95219 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SNX4O95219 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX4O95219 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX4O95219 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX4O95219 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNX4O95219 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX4O95219 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX4O95219 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX4O95219 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX4O95219 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX4O95219 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
SNX4O95219 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SNX4O95219 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.69■□□□□ 0.58
SNX4O95219 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.69■□□□□ 0.58
SNX4O95219 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX4O95219 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.69■□□□□ 0.58
SNX4O95219 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.69■□□□□ 0.58
SNX4O95219 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
SNX4O95219 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX4O95219 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX4O95219 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNX4O95219 KRT17P1-201ENST00000399211 1546 ntBASIC18.69■□□□□ 0.58
SNX4O95219 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNX4O95219 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.69■□□□□ 0.58
SNX4O95219 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.69■□□□□ 0.58
SNX4O95219 AC138932.1-201ENST00000534164 6830 ntBASIC18.69■□□□□ 0.58
SNX4O95219 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.68■□□□□ 0.58
SNX4O95219 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.68■□□□□ 0.58
SNX4O95219 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX4O95219 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX4O95219 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX4O95219 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX4O95219 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms