Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 MCRIP2P1-201ENST00000394346 511 ntBASIC17.89■□□□□ 0.45
UBL3O95164 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.89■□□□□ 0.45
UBL3O95164 AL050303.2-201ENST00000619798 666 ntBASIC17.89■□□□□ 0.45
UBL3O95164 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBL3O95164 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.89■□□□□ 0.45
UBL3O95164 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UBL3O95164 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
UBL3O95164 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.89■□□□□ 0.45
UBL3O95164 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBL3O95164 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UBL3O95164 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UBL3O95164 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBL3O95164 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBL3O95164 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBL3O95164 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBL3O95164 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
UBL3O95164 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UBL3O95164 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBL3O95164 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UBL3O95164 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.88■□□□□ 0.45
UBL3O95164 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.88■□□□□ 0.45
UBL3O95164 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.88■□□□□ 0.45
UBL3O95164 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.88■□□□□ 0.45
UBL3O95164 AC105036.2-201ENST00000569468 176 ntBASIC17.88■□□□□ 0.45
UBL3O95164 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
UBL3O95164 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.88■□□□□ 0.45
UBL3O95164 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
UBL3O95164 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBL3O95164 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBL3O95164 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UBL3O95164 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.88■□□□□ 0.45
UBL3O95164 AC098818.2-201ENST00000564925 2320 ntBASIC17.88■□□□□ 0.45
UBL3O95164 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UBL3O95164 CYP21A1P-202ENST00000354927 1481 ntBASIC17.88■□□□□ 0.45
UBL3O95164 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
UBL3O95164 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBL3O95164 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBL3O95164 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
UBL3O95164 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBL3O95164 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBL3O95164 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
UBL3O95164 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBL3O95164 AC116562.4-201ENST00000641316 2276 ntBASIC17.87■□□□□ 0.45
UBL3O95164 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBL3O95164 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.87■□□□□ 0.45
UBL3O95164 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.87■□□□□ 0.45
UBL3O95164 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBL3O95164 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.87■□□□□ 0.45
UBL3O95164 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.87■□□□□ 0.45
UBL3O95164 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.87■□□□□ 0.45
UBL3O95164 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.87■□□□□ 0.45
UBL3O95164 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBL3O95164 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBL3O95164 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBL3O95164 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.87■□□□□ 0.45
UBL3O95164 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBL3O95164 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBL3O95164 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBL3O95164 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
UBL3O95164 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBL3O95164 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
UBL3O95164 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.87■□□□□ 0.45
UBL3O95164 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBL3O95164 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBL3O95164 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBL3O95164 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.86■□□□□ 0.45
UBL3O95164 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBL3O95164 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBL3O95164 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBL3O95164 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBL3O95164 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBL3O95164 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
UBL3O95164 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBL3O95164 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.86■□□□□ 0.45
UBL3O95164 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.86■□□□□ 0.45
UBL3O95164 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
UBL3O95164 GPX1P1-201ENST00000388829 606 ntBASIC17.86■□□□□ 0.45
UBL3O95164 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.86■□□□□ 0.45
UBL3O95164 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.86■□□□□ 0.45
UBL3O95164 MIR2861-201ENST00000636310 90 ntBASIC17.86■□□□□ 0.45
UBL3O95164 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBL3O95164 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.86■□□□□ 0.45
UBL3O95164 AC087633.2-202ENST00000565166 1439 ntBASIC17.86■□□□□ 0.45
UBL3O95164 AC010980.2-201ENST00000587099 1412 ntBASIC17.86■□□□□ 0.45
UBL3O95164 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.86■□□□□ 0.45
UBL3O95164 MKRN4P-201ENST00000444706 1521 ntBASIC17.86■□□□□ 0.45
UBL3O95164 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
UBL3O95164 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBL3O95164 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBL3O95164 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBL3O95164 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBL3O95164 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.86■□□□□ 0.45
UBL3O95164 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
UBL3O95164 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
UBL3O95164 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBL3O95164 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
UBL3O95164 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.86■□□□□ 0.45
UBL3O95164 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.86■□□□□ 0.45
UBL3O95164 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.86■□□□□ 0.45
UBL3O95164 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms