Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
GDF9O60383 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GDF9O60383 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GDF9O60383 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GDF9O60383 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
GDF9O60383 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GDF9O60383 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GDF9O60383 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GDF9O60383 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GDF9O60383 PCED1CP-201ENST00000419887 785 ntBASIC19.55■□□□□ 0.72
GDF9O60383 AC128688.1-201ENST00000487626 519 ntBASIC19.55■□□□□ 0.72
GDF9O60383 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
GDF9O60383 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.55■□□□□ 0.72
GDF9O60383 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.55■□□□□ 0.72
GDF9O60383 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GDF9O60383 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.55■□□□□ 0.72
GDF9O60383 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.55■□□□□ 0.72
GDF9O60383 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GDF9O60383 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.55■□□□□ 0.72
GDF9O60383 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.54■□□□□ 0.72
GDF9O60383 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GDF9O60383 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GDF9O60383 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
GDF9O60383 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
GDF9O60383 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GDF9O60383 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.54■□□□□ 0.72
GDF9O60383 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
GDF9O60383 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.54■□□□□ 0.72
GDF9O60383 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.54■□□□□ 0.72
GDF9O60383 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.54■□□□□ 0.72
GDF9O60383 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.54■□□□□ 0.72
GDF9O60383 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.54■□□□□ 0.72
GDF9O60383 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.54■□□□□ 0.72
GDF9O60383 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.54■□□□□ 0.72
GDF9O60383 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.54■□□□□ 0.72
GDF9O60383 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
GDF9O60383 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
GDF9O60383 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.54■□□□□ 0.72
GDF9O60383 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GDF9O60383 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
GDF9O60383 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
GDF9O60383 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GDF9O60383 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GDF9O60383 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GDF9O60383 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GDF9O60383 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.54■□□□□ 0.72
GDF9O60383 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.53■□□□□ 0.72
GDF9O60383 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
GDF9O60383 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GDF9O60383 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.53■□□□□ 0.72
GDF9O60383 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
GDF9O60383 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
GDF9O60383 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.53■□□□□ 0.72
GDF9O60383 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.53■□□□□ 0.72
GDF9O60383 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.53■□□□□ 0.72
GDF9O60383 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.53■□□□□ 0.72
GDF9O60383 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GDF9O60383 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GDF9O60383 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
GDF9O60383 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
GDF9O60383 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GDF9O60383 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
GDF9O60383 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GDF9O60383 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.53■□□□□ 0.72
GDF9O60383 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
GDF9O60383 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.52■□□□□ 0.72
GDF9O60383 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GDF9O60383 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
GDF9O60383 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.52■□□□□ 0.72
GDF9O60383 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GDF9O60383 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GDF9O60383 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GDF9O60383 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
GDF9O60383 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GDF9O60383 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GDF9O60383 AC097488.1-201ENST00000507834 756 ntBASIC19.52■□□□□ 0.72
GDF9O60383 FAM86EP-206ENST00000510506 987 ntBASIC19.52■□□□□ 0.72
GDF9O60383 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.52■□□□□ 0.72
GDF9O60383 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.52■□□□□ 0.72
GDF9O60383 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
GDF9O60383 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
GDF9O60383 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
GDF9O60383 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
GDF9O60383 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
GDF9O60383 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.52■□□□□ 0.72
GDF9O60383 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
GDF9O60383 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
GDF9O60383 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
GDF9O60383 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GDF9O60383 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GDF9O60383 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
GDF9O60383 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.51■□□□□ 0.71
GDF9O60383 TSPY5P-201ENST00000426936 936 ntBASIC19.51■□□□□ 0.71
GDF9O60383 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.51■□□□□ 0.71
GDF9O60383 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.51■□□□□ 0.71
GDF9O60383 YBX1P2-201ENST00000489612 999 ntBASIC19.51■□□□□ 0.71
GDF9O60383 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.51■□□□□ 0.71
GDF9O60383 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GDF9O60383 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
GDF9O60383 CLEC4GP1-201ENST00000596555 870 ntBASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms