Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRICKLE3O43900 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.22■□□□□ 0.67
PRICKLE3O43900 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRICKLE3O43900 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRICKLE3O43900 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.22■□□□□ 0.67
PRICKLE3O43900 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRICKLE3O43900 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.22■□□□□ 0.67
PRICKLE3O43900 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRICKLE3O43900 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRICKLE3O43900 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRICKLE3O43900 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRICKLE3O43900 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.21■□□□□ 0.67
PRICKLE3O43900 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
PRICKLE3O43900 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.21■□□□□ 0.67
PRICKLE3O43900 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRICKLE3O43900 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRICKLE3O43900 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.21■□□□□ 0.67
PRICKLE3O43900 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRICKLE3O43900 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRICKLE3O43900 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRICKLE3O43900 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.21■□□□□ 0.67
PRICKLE3O43900 FAM201B-201ENST00000458407 597 ntBASIC19.21■□□□□ 0.67
PRICKLE3O43900 RPS2P52-201ENST00000469610 820 ntBASIC19.21■□□□□ 0.67
PRICKLE3O43900 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.21■□□□□ 0.67
PRICKLE3O43900 ITM2C-210ENST00000620962 501 ntBASIC19.21■□□□□ 0.67
PRICKLE3O43900 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
PRICKLE3O43900 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PRICKLE3O43900 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRICKLE3O43900 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRICKLE3O43900 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRICKLE3O43900 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PRICKLE3O43900 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRICKLE3O43900 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.2■□□□□ 0.66
PRICKLE3O43900 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PRICKLE3O43900 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
PRICKLE3O43900 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRICKLE3O43900 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRICKLE3O43900 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRICKLE3O43900 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRICKLE3O43900 AC099778.1-201ENST00000568593 1911 ntBASIC19.2■□□□□ 0.66
PRICKLE3O43900 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRICKLE3O43900 KRT16P6-202ENST00000425692 1426 ntBASIC19.2■□□□□ 0.66
PRICKLE3O43900 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRICKLE3O43900 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRICKLE3O43900 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
PRICKLE3O43900 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRICKLE3O43900 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRICKLE3O43900 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRICKLE3O43900 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRICKLE3O43900 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRICKLE3O43900 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.2■□□□□ 0.66
PRICKLE3O43900 AC233263.1-201ENST00000578059 224 ntBASIC19.2■□□□□ 0.66
PRICKLE3O43900 AC006058.3-201ENST00000606217 1069 ntBASIC19.2■□□□□ 0.66
PRICKLE3O43900 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PRICKLE3O43900 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.2■□□□□ 0.66
PRICKLE3O43900 AC124283.5-201ENST00000624661 1809 ntBASIC19.2■□□□□ 0.66
PRICKLE3O43900 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.2■□□□□ 0.66
PRICKLE3O43900 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.2■□□□□ 0.66
PRICKLE3O43900 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRICKLE3O43900 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRICKLE3O43900 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRICKLE3O43900 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PRICKLE3O43900 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRICKLE3O43900 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRICKLE3O43900 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PRICKLE3O43900 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PRICKLE3O43900 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.19■□□□□ 0.66
PRICKLE3O43900 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
PRICKLE3O43900 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRICKLE3O43900 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PRICKLE3O43900 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRICKLE3O43900 AC128676.1-201ENST00000454392 318 ntBASIC19.19■□□□□ 0.66
PRICKLE3O43900 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.19■□□□□ 0.66
PRICKLE3O43900 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.19■□□□□ 0.66
PRICKLE3O43900 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.19■□□□□ 0.66
PRICKLE3O43900 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.19■□□□□ 0.66
PRICKLE3O43900 AC073648.6-201ENST00000641589 218 ntBASIC19.19■□□□□ 0.66
PRICKLE3O43900 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
PRICKLE3O43900 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PRICKLE3O43900 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRICKLE3O43900 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRICKLE3O43900 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PRICKLE3O43900 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.19■□□□□ 0.66
PRICKLE3O43900 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRICKLE3O43900 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PRICKLE3O43900 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRICKLE3O43900 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.18■□□□□ 0.66
PRICKLE3O43900 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRICKLE3O43900 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRICKLE3O43900 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PRICKLE3O43900 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRICKLE3O43900 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PRICKLE3O43900 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRICKLE3O43900 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRICKLE3O43900 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.18■□□□□ 0.66
PRICKLE3O43900 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRICKLE3O43900 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.18■□□□□ 0.66
PRICKLE3O43900 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRICKLE3O43900 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRICKLE3O43900 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms