Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 AL353708.3-201ENST00000610272 989 ntBASIC20.23■□□□□ 0.83
NPC1O15118 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPC1O15118 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPC1O15118 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPC1O15118 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NPC1O15118 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
NPC1O15118 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.22■□□□□ 0.83
NPC1O15118 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.22■□□□□ 0.83
NPC1O15118 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
NPC1O15118 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
NPC1O15118 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
NPC1O15118 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.22■□□□□ 0.83
NPC1O15118 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.22■□□□□ 0.83
NPC1O15118 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
NPC1O15118 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.22■□□□□ 0.83
NPC1O15118 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.22■□□□□ 0.83
NPC1O15118 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.22■□□□□ 0.83
NPC1O15118 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
NPC1O15118 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.22■□□□□ 0.83
NPC1O15118 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.22■□□□□ 0.83
NPC1O15118 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPC1O15118 AC073195.1-201ENST00000607241 877 ntBASIC20.22■□□□□ 0.83
NPC1O15118 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.22■□□□□ 0.83
NPC1O15118 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.22■□□□□ 0.83
NPC1O15118 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.22■□□□□ 0.83
NPC1O15118 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPC1O15118 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPC1O15118 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.22■□□□□ 0.83
NPC1O15118 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPC1O15118 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPC1O15118 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPC1O15118 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NPC1O15118 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
NPC1O15118 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.21■□□□□ 0.83
NPC1O15118 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
NPC1O15118 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NPC1O15118 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.21■□□□□ 0.83
NPC1O15118 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
NPC1O15118 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NPC1O15118 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPC1O15118 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NPC1O15118 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NPC1O15118 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
NPC1O15118 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPC1O15118 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.2■□□□□ 0.82
NPC1O15118 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.2■□□□□ 0.82
NPC1O15118 AC006128.1-201ENST00000624704 1661 ntBASIC20.2■□□□□ 0.82
NPC1O15118 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.2■□□□□ 0.82
NPC1O15118 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.2■□□□□ 0.82
NPC1O15118 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPC1O15118 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPC1O15118 AC211429.1-201ENST00000415277 523 ntBASIC20.2■□□□□ 0.82
NPC1O15118 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPC1O15118 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPC1O15118 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.2■□□□□ 0.82
NPC1O15118 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.2■□□□□ 0.82
NPC1O15118 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.2■□□□□ 0.82
NPC1O15118 AC026471.5-201ENST00000615068 467 ntBASIC20.2■□□□□ 0.82
NPC1O15118 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NPC1O15118 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPC1O15118 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPC1O15118 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPC1O15118 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPC1O15118 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPC1O15118 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
NPC1O15118 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.2■□□□□ 0.82
NPC1O15118 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPC1O15118 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
NPC1O15118 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NPC1O15118 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPC1O15118 AL355355.2-201ENST00000442321 338 ntBASIC20.19■□□□□ 0.82
NPC1O15118 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
NPC1O15118 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.19■□□□□ 0.82
NPC1O15118 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.19■□□□□ 0.82
NPC1O15118 CD177P1-201ENST00000606252 935 ntBASIC20.19■□□□□ 0.82
NPC1O15118 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
NPC1O15118 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NPC1O15118 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPC1O15118 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
NPC1O15118 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPC1O15118 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPC1O15118 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPC1O15118 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NPC1O15118 AL121603.2-201ENST00000557373 2117 ntBASIC20.18■□□□□ 0.82
NPC1O15118 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPC1O15118 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.18■□□□□ 0.82
NPC1O15118 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.18■□□□□ 0.82
NPC1O15118 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPC1O15118 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPC1O15118 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NPC1O15118 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
NPC1O15118 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.18■□□□□ 0.82
NPC1O15118 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.18■□□□□ 0.82
NPC1O15118 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.18■□□□□ 0.82
NPC1O15118 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPC1O15118 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPC1O15118 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.18■□□□□ 0.82
NPC1O15118 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPC1O15118 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPC1O15118 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms