Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.64■□□□□ 0.57
AP3D1O14617 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP3D1O14617 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP3D1O14617 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
AP3D1O14617 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
AP3D1O14617 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
AP3D1O14617 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP3D1O14617 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
AP3D1O14617 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP3D1O14617 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP3D1O14617 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.64■□□□□ 0.57
AP3D1O14617 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
AP3D1O14617 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP3D1O14617 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
AP3D1O14617 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP3D1O14617 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP3D1O14617 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP3D1O14617 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
AP3D1O14617 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP3D1O14617 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP3D1O14617 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.63■□□□□ 0.57
AP3D1O14617 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP3D1O14617 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP3D1O14617 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.63■□□□□ 0.57
AP3D1O14617 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
AP3D1O14617 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.63■□□□□ 0.57
AP3D1O14617 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.63■□□□□ 0.57
AP3D1O14617 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.63■□□□□ 0.57
AP3D1O14617 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.63■□□□□ 0.57
AP3D1O14617 IKBKGP1-201ENST00000612193 1073 ntBASIC18.63■□□□□ 0.57
AP3D1O14617 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
AP3D1O14617 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP3D1O14617 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.63■□□□□ 0.57
AP3D1O14617 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
AP3D1O14617 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP3D1O14617 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
AP3D1O14617 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
AP3D1O14617 TCF3P1-201ENST00000423021 1937 ntBASIC18.62■□□□□ 0.57
AP3D1O14617 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.62■□□□□ 0.57
AP3D1O14617 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP3D1O14617 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP3D1O14617 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
AP3D1O14617 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP3D1O14617 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP3D1O14617 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
AP3D1O14617 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP3D1O14617 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.62■□□□□ 0.57
AP3D1O14617 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
AP3D1O14617 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.62■□□□□ 0.57
AP3D1O14617 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AP3D1O14617 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.62■□□□□ 0.57
AP3D1O14617 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AP3D1O14617 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP3D1O14617 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.62■□□□□ 0.57
AP3D1O14617 DPP3P2-201ENST00000416030 1696 ntBASIC18.62■□□□□ 0.57
AP3D1O14617 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AP3D1O14617 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP3D1O14617 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.62■□□□□ 0.57
AP3D1O14617 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP3D1O14617 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP3D1O14617 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
AP3D1O14617 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP3D1O14617 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
AP3D1O14617 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP3D1O14617 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
AP3D1O14617 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP3D1O14617 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.61■□□□□ 0.57
AP3D1O14617 AC068338.2-201ENST00000563278 1430 ntBASIC18.61■□□□□ 0.57
AP3D1O14617 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.61■□□□□ 0.57
AP3D1O14617 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP3D1O14617 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.61■□□□□ 0.57
AP3D1O14617 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP3D1O14617 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP3D1O14617 PGM5P4-201ENST00000421970 445 ntBASIC18.61■□□□□ 0.57
AP3D1O14617 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
AP3D1O14617 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.61■□□□□ 0.57
AP3D1O14617 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
AP3D1O14617 AC092437.1-201ENST00000624794 1048 ntBASIC18.61■□□□□ 0.57
AP3D1O14617 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.61■□□□□ 0.57
AP3D1O14617 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP3D1O14617 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
AP3D1O14617 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.61■□□□□ 0.57
AP3D1O14617 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.61■□□□□ 0.57
AP3D1O14617 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.61■□□□□ 0.57
AP3D1O14617 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3D1O14617 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
AP3D1O14617 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.6■□□□□ 0.57
AP3D1O14617 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3D1O14617 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
AP3D1O14617 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3D1O14617 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3D1O14617 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.6■□□□□ 0.57
AP3D1O14617 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
AP3D1O14617 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3D1O14617 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3D1O14617 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3D1O14617 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
AP3D1O14617 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3D1O14617 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.6■□□□□ 0.57
AP3D1O14617 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms