Protein–RNA interactions for Protein: O00453

LST1, Leukocyte-specific transcript 1 protein, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LST1O00453 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
LST1O00453 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LST1O00453 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
LST1O00453 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LST1O00453 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC13□□□□□ -0.33
LST1O00453 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
LST1O00453 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LST1O00453 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC13□□□□□ -0.33
LST1O00453 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC13□□□□□ -0.33
LST1O00453 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC13□□□□□ -0.33
LST1O00453 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC13□□□□□ -0.33
LST1O00453 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LST1O00453 AC005703.6-201ENST00000623265 1329 ntBASIC13□□□□□ -0.33
LST1O00453 ABHD17AP3-201ENST00000503096 1137 ntBASIC13□□□□□ -0.33
LST1O00453 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
LST1O00453 SNX5-217ENST00000606557 1087 ntBASIC13□□□□□ -0.33
LST1O00453 NKILA-201ENST00000613231 537 ntTSL 4 BASIC13□□□□□ -0.33
LST1O00453 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC13□□□□□ -0.33
LST1O00453 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
LST1O00453 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC13□□□□□ -0.33
LST1O00453 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LST1O00453 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LST1O00453 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
LST1O00453 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LST1O00453 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC13□□□□□ -0.33
LST1O00453 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LST1O00453 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC13□□□□□ -0.33
LST1O00453 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC13□□□□□ -0.33
LST1O00453 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
LST1O00453 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
LST1O00453 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC13□□□□□ -0.33
LST1O00453 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
LST1O00453 AL354751.1-201ENST00000412768 1863 ntBASIC12.99□□□□□ -0.33
LST1O00453 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LST1O00453 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LST1O00453 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LST1O00453 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
LST1O00453 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LST1O00453 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
LST1O00453 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC12.99□□□□□ -0.33
LST1O00453 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC12.99□□□□□ -0.33
LST1O00453 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
LST1O00453 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LST1O00453 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LST1O00453 DUX4L9-201ENST00000449051 1259 ntBASIC12.99□□□□□ -0.33
LST1O00453 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LST1O00453 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
LST1O00453 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LST1O00453 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC12.99□□□□□ -0.33
LST1O00453 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LST1O00453 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
LST1O00453 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
LST1O00453 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LST1O00453 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LST1O00453 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC12.99□□□□□ -0.33
LST1O00453 HTR7P1-202ENST00000624664 4411 ntBASIC12.99□□□□□ -0.33
LST1O00453 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LST1O00453 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC12.99□□□□□ -0.33
LST1O00453 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
LST1O00453 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
LST1O00453 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
LST1O00453 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LST1O00453 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC12.98□□□□□ -0.33
LST1O00453 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC12.98□□□□□ -0.33
LST1O00453 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC12.98□□□□□ -0.33
LST1O00453 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LST1O00453 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC12.98□□□□□ -0.33
LST1O00453 AL691432.2-201ENST00000607222 2038 ntBASIC12.98□□□□□ -0.33
LST1O00453 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LST1O00453 AC012313.1-201ENST00000593393 3059 ntBASIC12.98□□□□□ -0.33
LST1O00453 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LST1O00453 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LST1O00453 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LST1O00453 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LST1O00453 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC12.98□□□□□ -0.33
LST1O00453 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LST1O00453 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC12.98□□□□□ -0.33
LST1O00453 MBP-237ENST00000579129 1052 ntTSL 5 BASIC12.98□□□□□ -0.33
LST1O00453 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
LST1O00453 THA1P-201ENST00000590384 1145 ntBASIC12.98□□□□□ -0.33
LST1O00453 AL499627.2-201ENST00000606283 725 ntBASIC12.98□□□□□ -0.33
LST1O00453 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC12.98□□□□□ -0.33
LST1O00453 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC12.98□□□□□ -0.33
LST1O00453 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
LST1O00453 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
LST1O00453 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LST1O00453 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC12.98□□□□□ -0.33
LST1O00453 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
LST1O00453 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
LST1O00453 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC12.98□□□□□ -0.33
LST1O00453 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LST1O00453 BICD1-207ENST00000551848 1962 ntBASIC12.98□□□□□ -0.33
LST1O00453 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LST1O00453 MKRN4P-201ENST00000444706 1521 ntBASIC12.98□□□□□ -0.33
LST1O00453 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
LST1O00453 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LST1O00453 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LST1O00453 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LST1O00453 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LST1O00453 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms