Protein–RNA interactions for Protein: H3BUS1

SYS1-DBNDD2, SYS1-DBNDD2 readthrough (NMD candidate), humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYS1-DBNDD2H3BUS1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SYS1-DBNDD2H3BUS1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC14.39□□□□□ -0.11
SYS1-DBNDD2H3BUS1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC14.39□□□□□ -0.11
SYS1-DBNDD2H3BUS1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC14.39□□□□□ -0.11
SYS1-DBNDD2H3BUS1 AC068587.7-201ENST00000641602 218 ntBASIC14.39□□□□□ -0.11
SYS1-DBNDD2H3BUS1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SYS1-DBNDD2H3BUS1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC14.39□□□□□ -0.11
SYS1-DBNDD2H3BUS1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SYS1-DBNDD2H3BUS1 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SYS1-DBNDD2H3BUS1 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC14.39□□□□□ -0.11
SYS1-DBNDD2H3BUS1 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
SYS1-DBNDD2H3BUS1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SYS1-DBNDD2H3BUS1 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SYS1-DBNDD2H3BUS1 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
SYS1-DBNDD2H3BUS1 PRORSD1P-202ENST00000563365 2154 ntBASIC14.39□□□□□ -0.11
SYS1-DBNDD2H3BUS1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC14.39□□□□□ -0.11
SYS1-DBNDD2H3BUS1 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SYS1-DBNDD2H3BUS1 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.38□□□□□ -0.11
SYS1-DBNDD2H3BUS1 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC14.38□□□□□ -0.11
SYS1-DBNDD2H3BUS1 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.38□□□□□ -0.11
SYS1-DBNDD2H3BUS1 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
SYS1-DBNDD2H3BUS1 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SYS1-DBNDD2H3BUS1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SYS1-DBNDD2H3BUS1 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SYS1-DBNDD2H3BUS1 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SYS1-DBNDD2H3BUS1 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.38□□□□□ -0.11
SYS1-DBNDD2H3BUS1 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.38□□□□□ -0.11
SYS1-DBNDD2H3BUS1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SYS1-DBNDD2H3BUS1 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SYS1-DBNDD2H3BUS1 AC090164.3-201ENST00000610780 2143 ntBASIC14.38□□□□□ -0.11
SYS1-DBNDD2H3BUS1 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SYS1-DBNDD2H3BUS1 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.38□□□□□ -0.11
SYS1-DBNDD2H3BUS1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SYS1-DBNDD2H3BUS1 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SYS1-DBNDD2H3BUS1 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC14.38□□□□□ -0.11
SYS1-DBNDD2H3BUS1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SYS1-DBNDD2H3BUS1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SYS1-DBNDD2H3BUS1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC14.38□□□□□ -0.11
SYS1-DBNDD2H3BUS1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
SYS1-DBNDD2H3BUS1 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SYS1-DBNDD2H3BUS1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SYS1-DBNDD2H3BUS1 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SYS1-DBNDD2H3BUS1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SYS1-DBNDD2H3BUS1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SYS1-DBNDD2H3BUS1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC14.38□□□□□ -0.11
SYS1-DBNDD2H3BUS1 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SYS1-DBNDD2H3BUS1 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC14.38□□□□□ -0.11
SYS1-DBNDD2H3BUS1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SYS1-DBNDD2H3BUS1 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SYS1-DBNDD2H3BUS1 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SYS1-DBNDD2H3BUS1 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SYS1-DBNDD2H3BUS1 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC14.38□□□□□ -0.11
SYS1-DBNDD2H3BUS1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC14.37□□□□□ -0.11
SYS1-DBNDD2H3BUS1 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SYS1-DBNDD2H3BUS1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SYS1-DBNDD2H3BUS1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SYS1-DBNDD2H3BUS1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
SYS1-DBNDD2H3BUS1 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SYS1-DBNDD2H3BUS1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SYS1-DBNDD2H3BUS1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SYS1-DBNDD2H3BUS1 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
SYS1-DBNDD2H3BUS1 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SYS1-DBNDD2H3BUS1 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SYS1-DBNDD2H3BUS1 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC14.37□□□□□ -0.11
SYS1-DBNDD2H3BUS1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SYS1-DBNDD2H3BUS1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SYS1-DBNDD2H3BUS1 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SYS1-DBNDD2H3BUS1 KRT18P24-201ENST00000344739 1156 ntBASIC14.37□□□□□ -0.11
SYS1-DBNDD2H3BUS1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC14.37□□□□□ -0.11
SYS1-DBNDD2H3BUS1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC14.37□□□□□ -0.11
SYS1-DBNDD2H3BUS1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14.37□□□□□ -0.11
SYS1-DBNDD2H3BUS1 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SYS1-DBNDD2H3BUS1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.37□□□□□ -0.11
SYS1-DBNDD2H3BUS1 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
SYS1-DBNDD2H3BUS1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SYS1-DBNDD2H3BUS1 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SYS1-DBNDD2H3BUS1 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SYS1-DBNDD2H3BUS1 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SYS1-DBNDD2H3BUS1 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SYS1-DBNDD2H3BUS1 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.37□□□□□ -0.11
SYS1-DBNDD2H3BUS1 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SYS1-DBNDD2H3BUS1 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SYS1-DBNDD2H3BUS1 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SYS1-DBNDD2H3BUS1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SYS1-DBNDD2H3BUS1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SYS1-DBNDD2H3BUS1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC14.36□□□□□ -0.11
SYS1-DBNDD2H3BUS1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SYS1-DBNDD2H3BUS1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC14.36□□□□□ -0.11
SYS1-DBNDD2H3BUS1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC14.36□□□□□ -0.11
SYS1-DBNDD2H3BUS1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SYS1-DBNDD2H3BUS1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SYS1-DBNDD2H3BUS1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SYS1-DBNDD2H3BUS1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SYS1-DBNDD2H3BUS1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SYS1-DBNDD2H3BUS1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC14.36□□□□□ -0.11
SYS1-DBNDD2H3BUS1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC14.36□□□□□ -0.11
SYS1-DBNDD2H3BUS1 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
SYS1-DBNDD2H3BUS1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SYS1-DBNDD2H3BUS1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SYS1-DBNDD2H3BUS1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms