Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NACAE9PAV3 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NACAE9PAV3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
NACAE9PAV3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
NACAE9PAV3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NACAE9PAV3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC14.55□□□□□ -0.08
NACAE9PAV3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NACAE9PAV3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NACAE9PAV3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC14.55□□□□□ -0.08
NACAE9PAV3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NACAE9PAV3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC14.55□□□□□ -0.08
NACAE9PAV3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NACAE9PAV3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NACAE9PAV3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC14.55□□□□□ -0.08
NACAE9PAV3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
NACAE9PAV3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
NACAE9PAV3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC14.55□□□□□ -0.08
NACAE9PAV3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NACAE9PAV3 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NACAE9PAV3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC14.55□□□□□ -0.08
NACAE9PAV3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NACAE9PAV3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC14.55□□□□□ -0.08
NACAE9PAV3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NACAE9PAV3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC14.55□□□□□ -0.08
NACAE9PAV3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NACAE9PAV3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NACAE9PAV3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC14.55□□□□□ -0.08
NACAE9PAV3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NACAE9PAV3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC14.54□□□□□ -0.08
NACAE9PAV3 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NACAE9PAV3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
NACAE9PAV3 SLC29A4P1-201ENST00000398760 971 ntBASIC14.54□□□□□ -0.08
NACAE9PAV3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC14.54□□□□□ -0.08
NACAE9PAV3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC14.54□□□□□ -0.08
NACAE9PAV3 AC010536.3-201ENST00000620306 533 ntBASIC14.54□□□□□ -0.08
NACAE9PAV3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC14.54□□□□□ -0.08
NACAE9PAV3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
NACAE9PAV3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NACAE9PAV3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NACAE9PAV3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NACAE9PAV3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
NACAE9PAV3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NACAE9PAV3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NACAE9PAV3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NACAE9PAV3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
NACAE9PAV3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC14.54□□□□□ -0.08
NACAE9PAV3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC14.54□□□□□ -0.08
NACAE9PAV3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NACAE9PAV3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NACAE9PAV3 AC007322.1-201ENST00000426983 750 ntBASIC14.54□□□□□ -0.08
NACAE9PAV3 CYP2T1P-201ENST00000432607 1285 ntBASIC14.54□□□□□ -0.08
NACAE9PAV3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NACAE9PAV3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NACAE9PAV3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC14.54□□□□□ -0.08
NACAE9PAV3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NACAE9PAV3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC14.54□□□□□ -0.08
NACAE9PAV3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC14.54□□□□□ -0.08
NACAE9PAV3 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
NACAE9PAV3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NACAE9PAV3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NACAE9PAV3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC14.54□□□□□ -0.08
NACAE9PAV3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NACAE9PAV3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
NACAE9PAV3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NACAE9PAV3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NACAE9PAV3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NACAE9PAV3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC14.53□□□□□ -0.08
NACAE9PAV3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC14.53□□□□□ -0.08
NACAE9PAV3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC14.53□□□□□ -0.08
NACAE9PAV3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NACAE9PAV3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NACAE9PAV3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NACAE9PAV3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
NACAE9PAV3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NACAE9PAV3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NACAE9PAV3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NACAE9PAV3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NACAE9PAV3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC14.53□□□□□ -0.08
NACAE9PAV3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NACAE9PAV3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NACAE9PAV3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC14.53□□□□□ -0.08
NACAE9PAV3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC14.53□□□□□ -0.08
NACAE9PAV3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NACAE9PAV3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NACAE9PAV3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC14.53□□□□□ -0.08
NACAE9PAV3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NACAE9PAV3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC14.53□□□□□ -0.08
NACAE9PAV3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NACAE9PAV3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NACAE9PAV3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NACAE9PAV3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC14.52□□□□□ -0.08
NACAE9PAV3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NACAE9PAV3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NACAE9PAV3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
NACAE9PAV3 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
NACAE9PAV3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NACAE9PAV3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC14.52□□□□□ -0.08
NACAE9PAV3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
NACAE9PAV3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NACAE9PAV3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms