Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MEIS3P1A6NDR6 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
MEIS3P1A6NDR6 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
MEIS3P1A6NDR6 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.11■□□□□ 0.33
MEIS3P1A6NDR6 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.11■□□□□ 0.33
MEIS3P1A6NDR6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
MEIS3P1A6NDR6 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MEIS3P1A6NDR6 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
MEIS3P1A6NDR6 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.1■□□□□ 0.33
MEIS3P1A6NDR6 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MEIS3P1A6NDR6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MEIS3P1A6NDR6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MEIS3P1A6NDR6 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
MEIS3P1A6NDR6 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
MEIS3P1A6NDR6 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MEIS3P1A6NDR6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MEIS3P1A6NDR6 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MEIS3P1A6NDR6 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
MEIS3P1A6NDR6 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MEIS3P1A6NDR6 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MEIS3P1A6NDR6 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MEIS3P1A6NDR6 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MEIS3P1A6NDR6 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MEIS3P1A6NDR6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MEIS3P1A6NDR6 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.1■□□□□ 0.33
MEIS3P1A6NDR6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MEIS3P1A6NDR6 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
MEIS3P1A6NDR6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MEIS3P1A6NDR6 BX119927.1-201ENST00000636596 1552 ntBASIC17.1■□□□□ 0.33
MEIS3P1A6NDR6 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MEIS3P1A6NDR6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MEIS3P1A6NDR6 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MEIS3P1A6NDR6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MEIS3P1A6NDR6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MEIS3P1A6NDR6 AC116050.2-201ENST00000612102 1779 ntBASIC17.1■□□□□ 0.33
MEIS3P1A6NDR6 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MEIS3P1A6NDR6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MEIS3P1A6NDR6 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
MEIS3P1A6NDR6 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MEIS3P1A6NDR6 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.09■□□□□ 0.33
MEIS3P1A6NDR6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.09■□□□□ 0.33
MEIS3P1A6NDR6 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
MEIS3P1A6NDR6 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
MEIS3P1A6NDR6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MEIS3P1A6NDR6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
MEIS3P1A6NDR6 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
MEIS3P1A6NDR6 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.09■□□□□ 0.33
MEIS3P1A6NDR6 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MEIS3P1A6NDR6 AL136116.3-201ENST00000402907 1138 ntBASIC17.09■□□□□ 0.33
MEIS3P1A6NDR6 POU5F1P4-201ENST00000413175 1085 ntBASIC17.09■□□□□ 0.33
MEIS3P1A6NDR6 AC099791.1-201ENST00000416440 715 ntBASIC17.09■□□□□ 0.33
MEIS3P1A6NDR6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.09■□□□□ 0.33
MEIS3P1A6NDR6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.09■□□□□ 0.33
MEIS3P1A6NDR6 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MEIS3P1A6NDR6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MEIS3P1A6NDR6 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.09■□□□□ 0.33
MEIS3P1A6NDR6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
MEIS3P1A6NDR6 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.09■□□□□ 0.33
MEIS3P1A6NDR6 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.09■□□□□ 0.33
MEIS3P1A6NDR6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MEIS3P1A6NDR6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MEIS3P1A6NDR6 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MEIS3P1A6NDR6 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
MEIS3P1A6NDR6 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MEIS3P1A6NDR6 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
MEIS3P1A6NDR6 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
MEIS3P1A6NDR6 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
MEIS3P1A6NDR6 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
MEIS3P1A6NDR6 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.08■□□□□ 0.33
MEIS3P1A6NDR6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
MEIS3P1A6NDR6 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
MEIS3P1A6NDR6 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.08■□□□□ 0.33
MEIS3P1A6NDR6 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MEIS3P1A6NDR6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.08■□□□□ 0.32
MEIS3P1A6NDR6 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
MEIS3P1A6NDR6 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MEIS3P1A6NDR6 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MEIS3P1A6NDR6 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MEIS3P1A6NDR6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.08■□□□□ 0.32
MEIS3P1A6NDR6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MEIS3P1A6NDR6 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MEIS3P1A6NDR6 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MEIS3P1A6NDR6 AL136162.1-201ENST00000607711 1078 ntBASIC17.08■□□□□ 0.32
MEIS3P1A6NDR6 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
MEIS3P1A6NDR6 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MEIS3P1A6NDR6 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
MEIS3P1A6NDR6 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
MEIS3P1A6NDR6 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.08■□□□□ 0.32
MEIS3P1A6NDR6 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.08■□□□□ 0.32
MEIS3P1A6NDR6 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
MEIS3P1A6NDR6 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
MEIS3P1A6NDR6 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
MEIS3P1A6NDR6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MEIS3P1A6NDR6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MEIS3P1A6NDR6 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.07■□□□□ 0.32
MEIS3P1A6NDR6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
MEIS3P1A6NDR6 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MEIS3P1A6NDR6 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MEIS3P1A6NDR6 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.07■□□□□ 0.32
MEIS3P1A6NDR6 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms