Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-7A0A0A0MS04 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-7A0A0A0MS04 BX119927.1-201ENST00000636596 1552 ntBASIC16.72■□□□□ 0.27
TRBV6-7A0A0A0MS04 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV6-7A0A0A0MS04 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRBV6-7A0A0A0MS04 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TRBV6-7A0A0A0MS04 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV6-7A0A0A0MS04 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TRBV6-7A0A0A0MS04 AC093484.2-201ENST00000580996 2166 ntBASIC16.71■□□□□ 0.27
TRBV6-7A0A0A0MS04 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV6-7A0A0A0MS04 TMEM179-206ENST00000616017 1645 ntBASIC16.71■□□□□ 0.27
TRBV6-7A0A0A0MS04 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV6-7A0A0A0MS04 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV6-7A0A0A0MS04 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV6-7A0A0A0MS04 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV6-7A0A0A0MS04 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV6-7A0A0A0MS04 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
TRBV6-7A0A0A0MS04 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.71■□□□□ 0.27
TRBV6-7A0A0A0MS04 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
TRBV6-7A0A0A0MS04 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.71■□□□□ 0.27
TRBV6-7A0A0A0MS04 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.71■□□□□ 0.27
TRBV6-7A0A0A0MS04 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV6-7A0A0A0MS04 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV6-7A0A0A0MS04 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV6-7A0A0A0MS04 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV6-7A0A0A0MS04 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.71■□□□□ 0.27
TRBV6-7A0A0A0MS04 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV6-7A0A0A0MS04 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV6-7A0A0A0MS04 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TRBV6-7A0A0A0MS04 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRBV6-7A0A0A0MS04 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TRBV6-7A0A0A0MS04 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TRBV6-7A0A0A0MS04 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TRBV6-7A0A0A0MS04 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV6-7A0A0A0MS04 AL691432.2-201ENST00000607222 2038 ntBASIC16.7■□□□□ 0.26
TRBV6-7A0A0A0MS04 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.7■□□□□ 0.26
TRBV6-7A0A0A0MS04 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV6-7A0A0A0MS04 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV6-7A0A0A0MS04 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.7■□□□□ 0.26
TRBV6-7A0A0A0MS04 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV6-7A0A0A0MS04 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
TRBV6-7A0A0A0MS04 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV6-7A0A0A0MS04 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.7■□□□□ 0.26
TRBV6-7A0A0A0MS04 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV6-7A0A0A0MS04 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.7■□□□□ 0.26
TRBV6-7A0A0A0MS04 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.7■□□□□ 0.26
TRBV6-7A0A0A0MS04 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.7■□□□□ 0.26
TRBV6-7A0A0A0MS04 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.7■□□□□ 0.26
TRBV6-7A0A0A0MS04 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TRBV6-7A0A0A0MS04 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV6-7A0A0A0MS04 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV6-7A0A0A0MS04 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV6-7A0A0A0MS04 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.7■□□□□ 0.26
TRBV6-7A0A0A0MS04 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.7■□□□□ 0.26
TRBV6-7A0A0A0MS04 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV6-7A0A0A0MS04 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV6-7A0A0A0MS04 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV6-7A0A0A0MS04 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV6-7A0A0A0MS04 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-7A0A0A0MS04 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-7A0A0A0MS04 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-7A0A0A0MS04 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-7A0A0A0MS04 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-7A0A0A0MS04 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-7A0A0A0MS04 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-7A0A0A0MS04 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.69■□□□□ 0.26
TRBV6-7A0A0A0MS04 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-7A0A0A0MS04 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TRBV6-7A0A0A0MS04 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-7A0A0A0MS04 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-7A0A0A0MS04 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-7A0A0A0MS04 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-7A0A0A0MS04 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-7A0A0A0MS04 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
TRBV6-7A0A0A0MS04 PGM5P4-201ENST00000421970 445 ntBASIC16.69■□□□□ 0.26
TRBV6-7A0A0A0MS04 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-7A0A0A0MS04 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC16.69■□□□□ 0.26
TRBV6-7A0A0A0MS04 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC16.69■□□□□ 0.26
TRBV6-7A0A0A0MS04 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.69■□□□□ 0.26
TRBV6-7A0A0A0MS04 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
TRBV6-7A0A0A0MS04 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-7A0A0A0MS04 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-7A0A0A0MS04 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-7A0A0A0MS04 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TRBV6-7A0A0A0MS04 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-7A0A0A0MS04 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-7A0A0A0MS04 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-7A0A0A0MS04 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-7A0A0A0MS04 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
TRBV6-7A0A0A0MS04 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.69■□□□□ 0.26
TRBV6-7A0A0A0MS04 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-7A0A0A0MS04 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.69■□□□□ 0.26
TRBV6-7A0A0A0MS04 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-7A0A0A0MS04 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-7A0A0A0MS04 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-7A0A0A0MS04 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.68■□□□□ 0.26
TRBV6-7A0A0A0MS04 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-7A0A0A0MS04 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-7A0A0A0MS04 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-7A0A0A0MS04 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms