Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAV18A0A075B6X5 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV18A0A075B6X5 AC120498.10-201ENST00000621827 505 ntBASIC17.17■□□□□ 0.34
TRAV18A0A075B6X5 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV18A0A075B6X5 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV18A0A075B6X5 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV18A0A075B6X5 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV18A0A075B6X5 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRAV18A0A075B6X5 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
TRAV18A0A075B6X5 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV18A0A075B6X5 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
TRAV18A0A075B6X5 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV18A0A075B6X5 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV18A0A075B6X5 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV18A0A075B6X5 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV18A0A075B6X5 Z82202.1-201ENST00000623446 1880 ntBASIC17.16■□□□□ 0.34
TRAV18A0A075B6X5 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV18A0A075B6X5 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV18A0A075B6X5 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV18A0A075B6X5 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TRAV18A0A075B6X5 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV18A0A075B6X5 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV18A0A075B6X5 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV18A0A075B6X5 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV18A0A075B6X5 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAV18A0A075B6X5 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.16■□□□□ 0.34
TRAV18A0A075B6X5 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV18A0A075B6X5 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAV18A0A075B6X5 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAV18A0A075B6X5 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV18A0A075B6X5 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV18A0A075B6X5 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.16■□□□□ 0.34
TRAV18A0A075B6X5 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV18A0A075B6X5 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV18A0A075B6X5 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV18A0A075B6X5 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.16■□□□□ 0.34
TRAV18A0A075B6X5 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
TRAV18A0A075B6X5 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TRAV18A0A075B6X5 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV18A0A075B6X5 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV18A0A075B6X5 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.15■□□□□ 0.34
TRAV18A0A075B6X5 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.15■□□□□ 0.34
TRAV18A0A075B6X5 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TRAV18A0A075B6X5 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV18A0A075B6X5 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TRAV18A0A075B6X5 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV18A0A075B6X5 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV18A0A075B6X5 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV18A0A075B6X5 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
TRAV18A0A075B6X5 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV18A0A075B6X5 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TRAV18A0A075B6X5 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV18A0A075B6X5 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.15■□□□□ 0.34
TRAV18A0A075B6X5 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRAV18A0A075B6X5 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRAV18A0A075B6X5 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV18A0A075B6X5 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TRAV18A0A075B6X5 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV18A0A075B6X5 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.15■□□□□ 0.34
TRAV18A0A075B6X5 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV18A0A075B6X5 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV18A0A075B6X5 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.15■□□□□ 0.34
TRAV18A0A075B6X5 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV18A0A075B6X5 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.15■□□□□ 0.34
TRAV18A0A075B6X5 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TRAV18A0A075B6X5 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV18A0A075B6X5 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV18A0A075B6X5 AC135279.3-201ENST00000610945 1311 ntBASIC17.15■□□□□ 0.34
TRAV18A0A075B6X5 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
TRAV18A0A075B6X5 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV18A0A075B6X5 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV18A0A075B6X5 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV18A0A075B6X5 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.14■□□□□ 0.33
TRAV18A0A075B6X5 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV18A0A075B6X5 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV18A0A075B6X5 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.14■□□□□ 0.33
TRAV18A0A075B6X5 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TRAV18A0A075B6X5 AC093503.3-201ENST00000624917 2352 ntBASIC17.14■□□□□ 0.33
TRAV18A0A075B6X5 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV18A0A075B6X5 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TRAV18A0A075B6X5 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV18A0A075B6X5 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV18A0A075B6X5 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV18A0A075B6X5 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TRAV18A0A075B6X5 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.14■□□□□ 0.33
TRAV18A0A075B6X5 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRAV18A0A075B6X5 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV18A0A075B6X5 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV18A0A075B6X5 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV18A0A075B6X5 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.14■□□□□ 0.33
TRAV18A0A075B6X5 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAV18A0A075B6X5 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAV18A0A075B6X5 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV18A0A075B6X5 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV18A0A075B6X5 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRAV18A0A075B6X5 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAV18A0A075B6X5 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV18A0A075B6X5 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV18A0A075B6X5 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV18A0A075B6X5 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms