Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 SPATA31C2-201ENST00000324915 3777 ntBASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
C9orf40Q8IXQ3 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 ZNF812P-201ENST00000457674 1694 ntBASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 TPTE2P2-201ENST00000403471 1466 ntBASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 NPM1P14-201ENST00000343743 866 ntBASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 RN7SKP257-201ENST00000364525 309 ntBASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 MIR27A-201ENST00000385073 78 ntBASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 RNA5SP53-201ENST00000391299 120 ntBASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 RPS14P4-201ENST00000415880 418 ntBASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 GSTA6P-201ENST00000424144 582 ntBASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 AL121916.1-201ENST00000429405 308 ntBASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 AL592114.2-201ENST00000440142 532 ntBASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 AC027124.1-201ENST00000440852 466 ntBASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 AGKP1-201ENST00000455254 1263 ntBASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 SETP4-201ENST00000455717 868 ntBASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 SRP68P2-201ENST00000456184 254 ntBASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 AC023080.1-201ENST00000551663 931 ntBASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 AC245407.2-201ENST00000614199 451 ntBASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 AC009283.1-201ENST00000615852 645 ntBASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 RN7SL126P-201ENST00000616400 299 ntBASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 UGT2B25P-201ENST00000511504 1586 ntBASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
C9orf40Q8IXQ3 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 AC092821.2-201ENST00000545710 2042 ntBASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 AP003119.3-201ENST00000566747 4192 ntBASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 AC244452.1-201ENST00000413798 141 ntBASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 MEG8-201ENST00000414488 800 ntTSL 3 BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 CHCHD3P1-201ENST00000425516 676 ntBASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 AL354983.1-201ENST00000434580 906 ntBASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 RPS7P4-201ENST00000444127 582 ntBASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms