Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC6.75□□□□□ -1.33
SUMO3P55854 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC6.75□□□□□ -1.33
SUMO3P55854 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.75□□□□□ -1.33
SUMO3P55854 AC108157.1-201ENST00000510511 539 ntBASIC6.75□□□□□ -1.33
SUMO3P55854 RNU6-491P-201ENST00000516099 110 ntBASIC6.75□□□□□ -1.33
SUMO3P55854 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
SUMO3P55854 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC6.75□□□□□ -1.33
SUMO3P55854 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC6.75□□□□□ -1.33
SUMO3P55854 AC079866.1-201ENST00000534985 1220 ntBASIC6.75□□□□□ -1.33
SUMO3P55854 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC6.75□□□□□ -1.33
SUMO3P55854 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC6.75□□□□□ -1.33
SUMO3P55854 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.75□□□□□ -1.33
SUMO3P55854 HIGD1AP9-201ENST00000550710 279 ntBASIC6.75□□□□□ -1.33
SUMO3P55854 BMS1P15-201ENST00000554269 1141 ntBASIC6.75□□□□□ -1.33
SUMO3P55854 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC6.75□□□□□ -1.33
SUMO3P55854 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
SUMO3P55854 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
SUMO3P55854 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC6.75□□□□□ -1.33
SUMO3P55854 BOLA2P1-201ENST00000584794 232 ntBASIC6.75□□□□□ -1.33
SUMO3P55854 DNAJC19P3-201ENST00000594491 331 ntBASIC6.75□□□□□ -1.33
SUMO3P55854 CR382285.1-202ENST00000604687 547 ntBASIC6.75□□□□□ -1.33
SUMO3P55854 BNIP3P19-201ENST00000605397 577 ntBASIC6.75□□□□□ -1.33
SUMO3P55854 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC6.75□□□□□ -1.33
SUMO3P55854 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC6.75□□□□□ -1.33
SUMO3P55854 AC004839.1-201ENST00000610269 501 ntBASIC6.75□□□□□ -1.33
SUMO3P55854 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SUMO3P55854 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC6.75□□□□□ -1.33
SUMO3P55854 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SUMO3P55854 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
SUMO3P55854 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SUMO3P55854 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC6.75□□□□□ -1.33
SUMO3P55854 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
SUMO3P55854 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SUMO3P55854 AKT3-202ENST00000336199 1688 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SUMO3P55854 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
SUMO3P55854 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
SUMO3P55854 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SUMO3P55854 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC6.74□□□□□ -1.33
SUMO3P55854 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SUMO3P55854 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SUMO3P55854 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
SUMO3P55854 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.74□□□□□ -1.33
SUMO3P55854 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SUMO3P55854 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SUMO3P55854 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
SUMO3P55854 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
SUMO3P55854 AL138847.1-201ENST00000258651 546 ntBASIC6.74□□□□□ -1.33
SUMO3P55854 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SUMO3P55854 RN7SKP174-201ENST00000363803 330 ntBASIC6.74□□□□□ -1.33
SUMO3P55854 RNA5SP238-201ENST00000365464 120 ntBASIC6.74□□□□□ -1.33
SUMO3P55854 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC6.74□□□□□ -1.33
SUMO3P55854 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
SUMO3P55854 TRIM60P17-201ENST00000415181 719 ntBASIC6.74□□□□□ -1.33
SUMO3P55854 MTND2P15-201ENST00000418575 892 ntBASIC6.74□□□□□ -1.33
SUMO3P55854 FTOP1-201ENST00000419363 861 ntBASIC6.74□□□□□ -1.33
SUMO3P55854 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC6.74□□□□□ -1.33
SUMO3P55854 AC091730.1-201ENST00000440455 692 ntTSL 3 BASIC6.74□□□□□ -1.33
SUMO3P55854 AC114928.1-201ENST00000446516 415 ntBASIC6.74□□□□□ -1.33
SUMO3P55854 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC6.74□□□□□ -1.33
SUMO3P55854 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC6.74□□□□□ -1.33
SUMO3P55854 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC6.74□□□□□ -1.33
SUMO3P55854 AC016489.1-201ENST00000461109 375 ntBASIC6.74□□□□□ -1.33
SUMO3P55854 RN7SL91P-201ENST00000469313 291 ntBASIC6.74□□□□□ -1.33
SUMO3P55854 AC135999.1-201ENST00000478962 479 ntBASIC6.74□□□□□ -1.33
SUMO3P55854 AC084878.1-201ENST00000480555 648 ntBASIC6.74□□□□□ -1.33
SUMO3P55854 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC6.74□□□□□ -1.33
SUMO3P55854 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC6.74□□□□□ -1.33
SUMO3P55854 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SUMO3P55854 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC6.74□□□□□ -1.33
SUMO3P55854 AC027338.1-201ENST00000514840 825 ntBASIC6.74□□□□□ -1.33
SUMO3P55854 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC6.74□□□□□ -1.33
SUMO3P55854 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC6.74□□□□□ -1.33
SUMO3P55854 AC007611.1-202ENST00000564212 854 ntTSL 3 BASIC6.74□□□□□ -1.33
SUMO3P55854 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC6.74□□□□□ -1.33
SUMO3P55854 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC6.74□□□□□ -1.33
SUMO3P55854 BNIP3P39-201ENST00000601077 554 ntBASIC6.74□□□□□ -1.33
SUMO3P55854 AL049829.3-202ENST00000604278 711 ntBASIC6.74□□□□□ -1.33
SUMO3P55854 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
SUMO3P55854 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC6.74□□□□□ -1.33
SUMO3P55854 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SUMO3P55854 AC069222.1-201ENST00000608028 3360 ntBASIC6.74□□□□□ -1.33
SUMO3P55854 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
SUMO3P55854 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.74□□□□□ -1.33
SUMO3P55854 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
SUMO3P55854 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SUMO3P55854 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SUMO3P55854 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SUMO3P55854 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SUMO3P55854 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SUMO3P55854 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC6.74□□□□□ -1.33
SUMO3P55854 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC6.74□□□□□ -1.33
SUMO3P55854 AL049869.1-201ENST00000556933 1402 ntBASIC6.74□□□□□ -1.33
SUMO3P55854 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SUMO3P55854 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
SUMO3P55854 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SUMO3P55854 IARS-205ENST00000443024 4341 ntTSL 5 BASIC6.74□□□□□ -1.33
SUMO3P55854 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
SUMO3P55854 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
SUMO3P55854 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SUMO3P55854 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms