Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
POLR2AP24928 DLG2-218ENST00000524982 2872 ntTSL 2 BASIC8.16□□□□□ -1.1
POLR2AP24928 OR1D2-203ENST00000641833 4887 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
POLR2AP24928 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC8.16□□□□□ -1.1
POLR2AP24928 AC025040.2-201ENST00000558657 1852 ntBASIC8.16□□□□□ -1.1
POLR2AP24928 AL359715.1-201ENST00000404330 555 ntBASIC8.16□□□□□ -1.1
POLR2AP24928 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC8.16□□□□□ -1.1
POLR2AP24928 GAPDHP57-201ENST00000424400 585 ntBASIC8.16□□□□□ -1.1
POLR2AP24928 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC8.16□□□□□ -1.1
POLR2AP24928 RPS10P21-201ENST00000430654 475 ntBASIC8.16□□□□□ -1.1
POLR2AP24928 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC8.16□□□□□ -1.1
POLR2AP24928 GAPDHP33-201ENST00000443168 1013 ntBASIC8.16□□□□□ -1.1
POLR2AP24928 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC8.16□□□□□ -1.1
POLR2AP24928 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC8.16□□□□□ -1.1
POLR2AP24928 IGLVIV-64-201ENST00000518581 301 ntBASIC8.16□□□□□ -1.1
POLR2AP24928 ULK4P2-202ENST00000564187 492 ntBASIC8.16□□□□□ -1.1
POLR2AP24928 AL365223.1-201ENST00000574864 1297 ntBASIC8.16□□□□□ -1.1
POLR2AP24928 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC8.16□□□□□ -1.1
POLR2AP24928 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC8.16□□□□□ -1.1
POLR2AP24928 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
POLR2AP24928 PBRM1-208ENST00000410007 4905 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
POLR2AP24928 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC8.16□□□□□ -1.1
POLR2AP24928 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
POLR2AP24928 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC8.16□□□□□ -1.1
POLR2AP24928 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
POLR2AP24928 SPATA13-201ENST00000343003 6405 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
POLR2AP24928 YES1-205ENST00000584307 4639 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
POLR2AP24928 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
POLR2AP24928 BRDT-205ENST00000399546 3357 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
POLR2AP24928 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
POLR2AP24928 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
POLR2AP24928 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
POLR2AP24928 ZKSCAN1-201ENST00000324306 9418 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
POLR2AP24928 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
POLR2AP24928 GULP1-203ENST00000409609 1932 ntAPPRIS P3 TSL 2 BASIC8.15□□□□□ -1.1
POLR2AP24928 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC8.15□□□□□ -1.1
POLR2AP24928 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
POLR2AP24928 UBBP1-201ENST00000392399 473 ntBASIC8.15□□□□□ -1.1
POLR2AP24928 LYPLA1P3-201ENST00000402650 695 ntBASIC8.15□□□□□ -1.1
POLR2AP24928 RN7SKP108-201ENST00000411367 328 ntBASIC8.15□□□□□ -1.1
POLR2AP24928 RPL17P17-201ENST00000419491 557 ntBASIC8.15□□□□□ -1.1
POLR2AP24928 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
POLR2AP24928 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
POLR2AP24928 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
POLR2AP24928 AC011411.1-201ENST00000509592 876 ntBASIC8.15□□□□□ -1.1
POLR2AP24928 RPL41P2-201ENST00000544920 409 ntBASIC8.15□□□□□ -1.1
POLR2AP24928 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC8.15□□□□□ -1.1
POLR2AP24928 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC8.15□□□□□ -1.1
POLR2AP24928 DIMT1P1-201ENST00000603970 763 ntBASIC8.15□□□□□ -1.1
POLR2AP24928 AC079791.1-201ENST00000605356 973 ntBASIC8.15□□□□□ -1.1
POLR2AP24928 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
POLR2AP24928 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC8.15□□□□□ -1.1
POLR2AP24928 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
POLR2AP24928 TMCC1P1-201ENST00000518897 1980 ntBASIC8.15□□□□□ -1.1
POLR2AP24928 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
POLR2AP24928 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
POLR2AP24928 MAP7D3-204ENST00000370663 4446 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.1
POLR2AP24928 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
POLR2AP24928 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
POLR2AP24928 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
POLR2AP24928 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
POLR2AP24928 PCDH15-229ENST00000616114 5846 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
POLR2AP24928 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.1
POLR2AP24928 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
POLR2AP24928 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC8.15□□□□□ -1.11
POLR2AP24928 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC8.15□□□□□ -1.11
POLR2AP24928 AL365356.3-201ENST00000427341 657 ntTSL 3 BASIC8.15□□□□□ -1.11
POLR2AP24928 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC8.15□□□□□ -1.11
POLR2AP24928 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC8.15□□□□□ -1.11
POLR2AP24928 AC083806.1-201ENST00000468934 316 ntBASIC8.15□□□□□ -1.11
POLR2AP24928 RN7SL413P-201ENST00000482700 297 ntBASIC8.15□□□□□ -1.11
POLR2AP24928 CREM-242ENST00000490511 469 ntTSL 2 BASIC8.15□□□□□ -1.11
POLR2AP24928 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC8.15□□□□□ -1.11
POLR2AP24928 AP005597.2-201ENST00000526238 341 ntBASIC8.15□□□□□ -1.11
POLR2AP24928 AC006518.1-201ENST00000541449 943 ntBASIC8.15□□□□□ -1.11
POLR2AP24928 AL356019.2-201ENST00000556738 3829 ntBASIC8.15□□□□□ -1.11
POLR2AP24928 AC002310.3-201ENST00000569728 723 ntBASIC8.15□□□□□ -1.11
POLR2AP24928 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC8.15□□□□□ -1.11
POLR2AP24928 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC8.15□□□□□ -1.11
POLR2AP24928 AC091133.5-201ENST00000603088 301 ntBASIC8.15□□□□□ -1.11
POLR2AP24928 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC8.15□□□□□ -1.11
POLR2AP24928 AC099667.1-201ENST00000624222 469 ntBASIC8.15□□□□□ -1.11
POLR2AP24928 AC004943.1-203ENST00000624370 1074 ntBASIC8.15□□□□□ -1.11
POLR2AP24928 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC8.15□□□□□ -1.11
POLR2AP24928 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC8.15□□□□□ -1.11
POLR2AP24928 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC8.15□□□□□ -1.11
POLR2AP24928 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC8.15□□□□□ -1.11
POLR2AP24928 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
POLR2AP24928 FNDC3A-206ENST00000541916 6328 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
POLR2AP24928 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
POLR2AP24928 SETBP1-201ENST00000282030 9899 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
POLR2AP24928 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
POLR2AP24928 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC8.14□□□□□ -1.11
POLR2AP24928 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC8.14□□□□□ -1.11
POLR2AP24928 ZNF185-212ENST00000539731 4334 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
POLR2AP24928 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
POLR2AP24928 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
POLR2AP24928 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
POLR2AP24928 TINAG-202ENST00000370864 692 ntTSL 2 BASIC8.14□□□□□ -1.11
POLR2AP24928 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC8.14□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms