Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AL390840.1-201ENST00000420303 988 ntBASIC9.49□□□□□ -0.89
LRCH3Q96II8 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC9.49□□□□□ -0.89
LRCH3Q96II8 YBX1P8-201ENST00000421881 943 ntBASIC9.49□□□□□ -0.89
LRCH3Q96II8 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC9.49□□□□□ -0.89
LRCH3Q96II8 AL590103.1-201ENST00000434488 307 ntBASIC9.49□□□□□ -0.89
LRCH3Q96II8 AC004006.1-201ENST00000434994 377 ntBASIC9.49□□□□□ -0.89
LRCH3Q96II8 PCNPP2-201ENST00000441651 455 ntBASIC9.49□□□□□ -0.89
LRCH3Q96II8 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC9.49□□□□□ -0.89
LRCH3Q96II8 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC9.49□□□□□ -0.89
LRCH3Q96II8 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC9.49□□□□□ -0.89
LRCH3Q96II8 RPL29P25-201ENST00000465069 850 ntBASIC9.49□□□□□ -0.89
LRCH3Q96II8 PHYKPL-205ENST00000476170 824 ntTSL 4 BASIC9.49□□□□□ -0.89
LRCH3Q96II8 RBM43P1-201ENST00000476891 1081 ntBASIC9.49□□□□□ -0.89
LRCH3Q96II8 RN7SL776P-201ENST00000493390 268 ntBASIC9.49□□□□□ -0.89
LRCH3Q96II8 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC9.49□□□□□ -0.89
LRCH3Q96II8 AC093824.1-201ENST00000508796 343 ntBASIC9.49□□□□□ -0.89
LRCH3Q96II8 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC9.49□□□□□ -0.89
LRCH3Q96II8 IMPA1P1-201ENST00000510718 842 ntBASIC9.49□□□□□ -0.89
LRCH3Q96II8 TCP11X3P-202ENST00000514289 1254 ntBASIC9.49□□□□□ -0.89
LRCH3Q96II8 AC084128.1-201ENST00000523112 501 ntTSL 3 BASIC9.49□□□□□ -0.89
LRCH3Q96II8 TPT1-AS1-218ENST00000523445 856 ntTSL 5 BASIC9.49□□□□□ -0.89
LRCH3Q96II8 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC9.49□□□□□ -0.89
LRCH3Q96II8 AP003072.1-201ENST00000531740 145 ntBASIC9.49□□□□□ -0.89
LRCH3Q96II8 TMEM132D-AS1-206ENST00000541320 440 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
LRCH3Q96II8 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
LRCH3Q96II8 FOXG1-AS1-201ENST00000546560 538 ntTSL 3 BASIC9.49□□□□□ -0.89
LRCH3Q96II8 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC9.49□□□□□ -0.89
LRCH3Q96II8 AC009121.2-201ENST00000572913 714 ntTSL 3 BASIC9.49□□□□□ -0.89
LRCH3Q96II8 AC027281.1-201ENST00000574178 758 ntBASIC9.49□□□□□ -0.89
LRCH3Q96II8 RN7SL203P-201ENST00000579600 296 ntBASIC9.49□□□□□ -0.89
LRCH3Q96II8 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC9.49□□□□□ -0.89
LRCH3Q96II8 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC9.49□□□□□ -0.89
LRCH3Q96II8 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC9.49□□□□□ -0.89
LRCH3Q96II8 SLC6A21P-201ENST00000599458 369 ntBASIC9.49□□□□□ -0.89
LRCH3Q96II8 AL360085.1-201ENST00000604713 532 ntBASIC9.49□□□□□ -0.89
LRCH3Q96II8 AL589743.7-201ENST00000612637 233 ntBASIC9.49□□□□□ -0.89
LRCH3Q96II8 AC022784.8-201ENST00000623764 559 ntBASIC9.49□□□□□ -0.89
LRCH3Q96II8 CACNA1S-202ENST00000367338 5996 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
LRCH3Q96II8 STYK1-201ENST00000075503 2995 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
LRCH3Q96II8 TRY2P-202ENST00000616556 2039 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
LRCH3Q96II8 NF1P9-201ENST00000629326 2008 ntBASIC9.49□□□□□ -0.89
LRCH3Q96II8 MARK3-207ENST00000553942 2298 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
LRCH3Q96II8 ANKRD55-201ENST00000341048 2502 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
LRCH3Q96II8 MCM3AP-AS1-201ENST00000414659 2539 ntTSL 2 BASIC9.49□□□□□ -0.89
LRCH3Q96II8 SLITRK1-201ENST00000377084 5189 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
LRCH3Q96II8 ARHGEF11-202ENST00000368194 6889 ntAPPRIS P4 TSL 1 (best) BASIC9.49□□□□□ -0.89
LRCH3Q96II8 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
LRCH3Q96II8 SCYL3-203ENST00000367772 3090 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
LRCH3Q96II8 NIP7-202ENST00000254941 1887 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
LRCH3Q96II8 RASSF2-202ENST00000379400 5427 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
LRCH3Q96II8 ELK3-201ENST00000228741 4205 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
LRCH3Q96II8 CLTCL1-202ENST00000427926 5513 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
LRCH3Q96II8 COL6A3-204ENST00000392003 3464 ntTSL 2 BASIC9.48□□□□□ -0.89
LRCH3Q96II8 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LRCH3Q96II8 TMEM116-213ENST00000550831 1446 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
LRCH3Q96II8 AP002884.3-201ENST00000504610 2749 ntTSL 2 BASIC9.48□□□□□ -0.89
LRCH3Q96II8 CUX1-206ENST00000437600 3031 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LRCH3Q96II8 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
LRCH3Q96II8 ALDH7A1-227ENST00000636879 2501 ntTSL 5 BASIC9.48□□□□□ -0.89
LRCH3Q96II8 ZNF615-214ENST00000618049 2284 ntTSL 5 BASIC9.48□□□□□ -0.89
LRCH3Q96II8 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
LRCH3Q96II8 ITGA10-204ENST00000539363 4735 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LRCH3Q96II8 NEK1-203ENST00000507142 5556 ntAPPRIS P4 TSL 1 (best) BASIC9.48□□□□□ -0.89
LRCH3Q96II8 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC9.48□□□□□ -0.89
LRCH3Q96II8 NCOA4-207ENST00000585132 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
LRCH3Q96II8 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
LRCH3Q96II8 AL391994.1-201ENST00000254724 282 ntBASIC9.48□□□□□ -0.89
LRCH3Q96II8 OR4D6-201ENST00000300127 1054 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
LRCH3Q96II8 RPL10P16-201ENST00000325000 645 ntBASIC9.48□□□□□ -0.89
LRCH3Q96II8 SNORA71D-201ENST00000363484 134 ntBASIC9.48□□□□□ -0.89
LRCH3Q96II8 Y_RNA.263-201ENST00000364659 114 ntBASIC9.48□□□□□ -0.89
LRCH3Q96II8 RNA5SP149-201ENST00000364952 92 ntBASIC9.48□□□□□ -0.89
LRCH3Q96II8 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC9.48□□□□□ -0.89
LRCH3Q96II8 MTCO1P56-201ENST00000401674 224 ntBASIC9.48□□□□□ -0.89
LRCH3Q96II8 CIR1P3-201ENST00000405137 479 ntBASIC9.48□□□□□ -0.89
LRCH3Q96II8 U3.38-201ENST00000408534 216 ntBASIC9.48□□□□□ -0.89
LRCH3Q96II8 OR4E2-201ENST00000408935 942 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
LRCH3Q96II8 RNU6-757P-201ENST00000410334 100 ntBASIC9.48□□□□□ -0.89
LRCH3Q96II8 AL022724.1-201ENST00000412132 554 ntTSL 3 BASIC9.48□□□□□ -0.89
LRCH3Q96II8 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LRCH3Q96II8 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC9.48□□□□□ -0.89
LRCH3Q96II8 SLIT1-AS1-201ENST00000424428 689 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LRCH3Q96II8 AC008850.1-201ENST00000427546 362 ntBASIC9.48□□□□□ -0.89
LRCH3Q96II8 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC9.48□□□□□ -0.89
LRCH3Q96II8 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC9.48□□□□□ -0.89
LRCH3Q96II8 CR391992.1-201ENST00000438601 394 ntBASIC9.48□□□□□ -0.89
LRCH3Q96II8 LYZL4-202ENST00000441172 838 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
LRCH3Q96II8 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC9.48□□□□□ -0.89
LRCH3Q96II8 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC9.48□□□□□ -0.89
LRCH3Q96II8 BX322784.1-201ENST00000455793 1077 ntBASIC9.48□□□□□ -0.89
LRCH3Q96II8 AC015864.1-201ENST00000496512 544 ntBASIC9.48□□□□□ -0.89
LRCH3Q96II8 RPL4P1-201ENST00000496596 1278 ntBASIC9.48□□□□□ -0.89
LRCH3Q96II8 PFN2-217ENST00000498307 556 ntTSL 4 BASIC9.48□□□□□ -0.89
LRCH3Q96II8 AC073648.3-201ENST00000504939 925 ntBASIC9.48□□□□□ -0.89
LRCH3Q96II8 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC9.48□□□□□ -0.89
LRCH3Q96II8 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC9.48□□□□□ -0.89
LRCH3Q96II8 TMEM185AP1-201ENST00000524311 546 ntBASIC9.48□□□□□ -0.89
LRCH3Q96II8 RGS5-219ENST00000528019 512 ntTSL 4 BASIC9.48□□□□□ -0.89
LRCH3Q96II8 AP003049.2-201ENST00000532992 540 ntTSL 4 BASIC9.48□□□□□ -0.89
LRCH3Q96II8 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC9.48□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms