Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 LINC00499-203ENST00000510736 587 ntTSL 5 BASIC8.63□□□□□ -1.03
FOXR1Q6PIV2 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC8.63□□□□□ -1.03
FOXR1Q6PIV2 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC8.63□□□□□ -1.03
FOXR1Q6PIV2 RNA5SP460-201ENST00000516789 100 ntBASIC8.63□□□□□ -1.03
FOXR1Q6PIV2 AC022730.3-201ENST00000521051 736 ntTSL 5 BASIC8.63□□□□□ -1.03
FOXR1Q6PIV2 AC084128.1-201ENST00000523112 501 ntTSL 3 BASIC8.63□□□□□ -1.03
FOXR1Q6PIV2 AC022880.2-201ENST00000532664 270 ntBASIC8.63□□□□□ -1.03
FOXR1Q6PIV2 AP000619.2-201ENST00000546014 969 ntBASIC8.63□□□□□ -1.03
FOXR1Q6PIV2 AC020612.1-201ENST00000547655 541 ntBASIC8.63□□□□□ -1.03
FOXR1Q6PIV2 AC120498.4-201ENST00000561649 320 ntTSL 3 BASIC8.63□□□□□ -1.03
FOXR1Q6PIV2 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC8.63□□□□□ -1.03
FOXR1Q6PIV2 CCL2-202ENST00000580907 736 ntTSL 2 BASIC8.63□□□□□ -1.03
FOXR1Q6PIV2 AC087393.2-201ENST00000580962 504 ntTSL 3 BASIC8.63□□□□□ -1.03
FOXR1Q6PIV2 RN7SL49P-201ENST00000581392 298 ntBASIC8.63□□□□□ -1.03
FOXR1Q6PIV2 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
FOXR1Q6PIV2 ZNF415-209ENST00000595813 580 ntTSL 4 BASIC8.63□□□□□ -1.03
FOXR1Q6PIV2 AL021807.1-201ENST00000607175 565 ntBASIC8.63□□□□□ -1.03
FOXR1Q6PIV2 AC116050.1-201ENST00000609777 1194 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
FOXR1Q6PIV2 AC027271.1-201ENST00000610270 610 ntBASIC8.63□□□□□ -1.03
FOXR1Q6PIV2 AC025253.1-201ENST00000613623 543 ntBASIC8.63□□□□□ -1.03
FOXR1Q6PIV2 AL590491.1-202ENST00000618038 394 ntBASIC8.63□□□□□ -1.03
FOXR1Q6PIV2 AL356599.1-202ENST00000626919 218 ntTSL 5 BASIC8.63□□□□□ -1.03
FOXR1Q6PIV2 OR7A2P-202ENST00000641312 1219 ntBASIC8.63□□□□□ -1.03
FOXR1Q6PIV2 CAGE1-202ENST00000338150 2771 ntAPPRIS ALT2 TSL 2 BASIC8.63□□□□□ -1.03
FOXR1Q6PIV2 COPG1-201ENST00000314797 3078 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
FOXR1Q6PIV2 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
FOXR1Q6PIV2 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC8.63□□□□□ -1.03
FOXR1Q6PIV2 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
FOXR1Q6PIV2 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
FOXR1Q6PIV2 CCDC39-201ENST00000442201 3279 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
FOXR1Q6PIV2 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC8.63□□□□□ -1.03
FOXR1Q6PIV2 NR1I3-205ENST00000367983 1473 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
FOXR1Q6PIV2 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
FOXR1Q6PIV2 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC8.63□□□□□ -1.03
FOXR1Q6PIV2 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 XAF1-202ENST00000361842 3623 ntAPPRIS P4 TSL 1 (best) BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 AC019155.2-201ENST00000420224 1918 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 NVL-202ENST00000340871 2431 ntTSL 2 BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 RTP3-201ENST00000296142 1321 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 AC114324.1-201ENST00000504077 3152 ntBASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 AL445231.1-201ENST00000445523 1814 ntTSL 2 BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 CRNKL1-202ENST00000377340 4406 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 ZNF2-204ENST00000617923 3885 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 ODF1-201ENST00000285402 1013 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 OR5E1P-201ENST00000305754 927 ntBASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 CENPW-202ENST00000368326 443 ntTSL 2 BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 MORN5-201ENST00000373764 705 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 Y_RNA.517-201ENST00000384551 106 ntBASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 FIGN-202ENST00000409634 746 ntTSL 5 BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 RN7SKP152-201ENST00000410444 315 ntBASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 RNU4-27P-201ENST00000410889 139 ntBASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 AC245452.3-201ENST00000413294 162 ntBASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 LINC00316-201ENST00000416722 455 ntTSL 2 BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 OR6C64P-201ENST00000419708 825 ntBASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 AL355863.1-201ENST00000424331 293 ntBASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 DPRXP1-201ENST00000426312 460 ntBASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 AL596276.1-201ENST00000434465 418 ntBASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 AL133387.1-201ENST00000442188 382 ntTSL 3 BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 AL136452.1-201ENST00000448495 439 ntBASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 AC020595.1-201ENST00000456446 533 ntTSL 3 BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 AC108039.1-201ENST00000456719 609 ntBASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 PET100-201ENST00000456958 219 ntTSL 2 BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 LINC00489-201ENST00000457816 543 ntTSL 5 BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 RN7SL685P-201ENST00000476271 298 ntBASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 AP001124.1-201ENST00000529628 385 ntBASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 HNRNPKP3-202ENST00000533565 589 ntTSL 4 BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 CXorf56-203ENST00000536133 1089 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 AC090607.2-201ENST00000560331 695 ntBASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 VWA3A-205ENST00000563755 861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 AC013565.2-201ENST00000564874 310 ntBASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 AC087481.2-201ENST00000565492 330 ntBASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 AA06-201ENST00000579745 632 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 AC069366.1-201ENST00000583159 838 ntBASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 ZNF559-205ENST00000586255 1016 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 AC008759.1-201ENST00000589783 983 ntBASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 AL021878.2-201ENST00000602718 399 ntBASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 AL049829.3-202ENST00000604278 711 ntBASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 AC073218.2-201ENST00000606468 295 ntTSL 5 BASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 TUSC7.1-201ENST00000610969 165 ntBASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 AC009053.4-201ENST00000614366 108 ntBASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 AL109614.1-201ENST00000620327 419 ntBASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 Metazoa_SRP.108-201ENST00000621610 300 ntBASIC8.62□□□□□ -1.03
FOXR1Q6PIV2 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC8.62□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms