Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
PDS5AQ29RF7 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PDS5AQ29RF7 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
PDS5AQ29RF7 RNU6-1017P-201ENST00000363613 106 ntBASIC8.54□□□□□ -1.04
PDS5AQ29RF7 RN7SKP118-201ENST00000364331 330 ntBASIC8.54□□□□□ -1.04
PDS5AQ29RF7 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 AC091492.1-201ENST00000419844 272 ntBASIC8.54□□□□□ -1.04
PDS5AQ29RF7 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 GOT2P2-201ENST00000450663 1251 ntBASIC8.54□□□□□ -1.04
PDS5AQ29RF7 RN7SL870P-201ENST00000460111 296 ntBASIC8.54□□□□□ -1.04
PDS5AQ29RF7 AC017007.3-201ENST00000479865 435 ntBASIC8.54□□□□□ -1.04
PDS5AQ29RF7 AC008868.1-201ENST00000509786 737 ntBASIC8.54□□□□□ -1.04
PDS5AQ29RF7 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC8.54□□□□□ -1.04
PDS5AQ29RF7 IGKV2OR2-7-201ENST00000604652 304 ntBASIC8.54□□□□□ -1.04
PDS5AQ29RF7 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 AL138693.1-201ENST00000622219 129 ntBASIC8.54□□□□□ -1.04
PDS5AQ29RF7 AL049541.2-201ENST00000626377 555 ntBASIC8.54□□□□□ -1.04
PDS5AQ29RF7 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 LPP-208ENST00000448637 5835 ntTSL 5 BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 AC079178.2-201ENST00000439323 1624 ntBASIC8.54□□□□□ -1.04
PDS5AQ29RF7 CNPY1-204ENST00000636446 1637 ntAPPRIS P5 TSL 5 BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 AC079248.1-201ENST00000427568 1546 ntBASIC8.54□□□□□ -1.04
PDS5AQ29RF7 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 SUMO2P13-201ENST00000403109 272 ntBASIC8.54□□□□□ -1.04
PDS5AQ29RF7 RPLP1P10-201ENST00000413972 339 ntBASIC8.54□□□□□ -1.04
PDS5AQ29RF7 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 AC007365.2-201ENST00000428806 458 ntBASIC8.54□□□□□ -1.04
PDS5AQ29RF7 PRDX1P1-201ENST00000449329 596 ntBASIC8.54□□□□□ -1.04
PDS5AQ29RF7 RPL34P34-201ENST00000465389 354 ntBASIC8.54□□□□□ -1.04
PDS5AQ29RF7 RN7SL655P-201ENST00000486087 298 ntBASIC8.54□□□□□ -1.04
PDS5AQ29RF7 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 IGLVV-66-201ENST00000523818 341 ntBASIC8.54□□□□□ -1.04
PDS5AQ29RF7 AC021820.1-201ENST00000525564 808 ntBASIC8.54□□□□□ -1.04
PDS5AQ29RF7 AP002004.1-206ENST00000532441 876 ntBASIC8.54□□□□□ -1.04
PDS5AQ29RF7 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 AC130456.6-201ENST00000623745 765 ntBASIC8.54□□□□□ -1.04
PDS5AQ29RF7 AC017037.4-201ENST00000624526 826 ntBASIC8.54□□□□□ -1.04
PDS5AQ29RF7 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC8.54□□□□□ -1.04
PDS5AQ29RF7 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PDS5AQ29RF7 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
PDS5AQ29RF7 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
PDS5AQ29RF7 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PDS5AQ29RF7 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PDS5AQ29RF7 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
PDS5AQ29RF7 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC8.53□□□□□ -1.04
PDS5AQ29RF7 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PDS5AQ29RF7 ZSWIM5P3-201ENST00000511265 2743 ntBASIC8.53□□□□□ -1.04
PDS5AQ29RF7 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PDS5AQ29RF7 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC8.53□□□□□ -1.04
PDS5AQ29RF7 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PDS5AQ29RF7 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
PDS5AQ29RF7 ZNF19-210ENST00000567225 2838 ntTSL 3 BASIC8.53□□□□□ -1.04
PDS5AQ29RF7 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC8.53□□□□□ -1.04
PDS5AQ29RF7 MITF-203ENST00000328528 4680 ntTSL 5 BASIC8.53□□□□□ -1.04
PDS5AQ29RF7 AF131215.2-201ENST00000531549 1710 ntBASIC8.53□□□□□ -1.04
PDS5AQ29RF7 MED6-212ENST00000615788 1700 ntTSL 5 BASIC8.53□□□□□ -1.04
PDS5AQ29RF7 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC8.53□□□□□ -1.04
PDS5AQ29RF7 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC8.53□□□□□ -1.04
PDS5AQ29RF7 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PDS5AQ29RF7 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PDS5AQ29RF7 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
PDS5AQ29RF7 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC8.53□□□□□ -1.04
PDS5AQ29RF7 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PDS5AQ29RF7 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms