Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DQB1P01920 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DQB1P01920 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DQB1P01920 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.14□□□□□ -1.43
HLA-DQB1P01920 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC6.14□□□□□ -1.43
HLA-DQB1P01920 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.14□□□□□ -1.43
HLA-DQB1P01920 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
HLA-DQB1P01920 RNA5SP263-201ENST00000363376 128 ntBASIC6.14□□□□□ -1.43
HLA-DQB1P01920 SSR1P1-201ENST00000407630 814 ntBASIC6.14□□□□□ -1.43
HLA-DQB1P01920 AC004009.1-201ENST00000412413 567 ntTSL 5 BASIC6.14□□□□□ -1.43
HLA-DQB1P01920 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DQB1P01920 AL365295.1-204ENST00000425648 553 ntTSL 4 BASIC6.14□□□□□ -1.43
HLA-DQB1P01920 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.14□□□□□ -1.43
HLA-DQB1P01920 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.14□□□□□ -1.43
HLA-DQB1P01920 LINC01508-202ENST00000436671 755 ntTSL 3 BASIC6.14□□□□□ -1.43
HLA-DQB1P01920 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC6.14□□□□□ -1.43
HLA-DQB1P01920 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC6.14□□□□□ -1.43
HLA-DQB1P01920 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.14□□□□□ -1.43
HLA-DQB1P01920 PRDX1P1-201ENST00000449329 596 ntBASIC6.14□□□□□ -1.43
HLA-DQB1P01920 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DQB1P01920 H3F3AP3-201ENST00000497682 407 ntBASIC6.14□□□□□ -1.43
HLA-DQB1P01920 HOXB-AS1-203ENST00000504972 680 ntTSL 3 BASIC6.14□□□□□ -1.43
HLA-DQB1P01920 GAPDHP31-201ENST00000509325 1014 ntBASIC6.14□□□□□ -1.43
HLA-DQB1P01920 AC095059.2-201ENST00000510601 933 ntBASIC6.14□□□□□ -1.43
HLA-DQB1P01920 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC6.14□□□□□ -1.43
HLA-DQB1P01920 RN7SKP248-201ENST00000516278 305 ntBASIC6.14□□□□□ -1.43
HLA-DQB1P01920 SCARNA20.3-201ENST00000516913 131 ntBASIC6.14□□□□□ -1.43
HLA-DQB1P01920 C8orf87-201ENST00000521906 588 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DQB1P01920 OR7E96P-201ENST00000530816 976 ntBASIC6.14□□□□□ -1.43
HLA-DQB1P01920 OR4A21P-201ENST00000532759 944 ntBASIC6.14□□□□□ -1.43
HLA-DQB1P01920 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DQB1P01920 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC6.14□□□□□ -1.43
HLA-DQB1P01920 CYP4A26P-201ENST00000563017 196 ntBASIC6.14□□□□□ -1.43
HLA-DQB1P01920 LINC01515-207ENST00000598092 496 ntTSL 3 BASIC6.14□□□□□ -1.43
HLA-DQB1P01920 AC091193.1-201ENST00000604640 448 ntBASIC6.14□□□□□ -1.43
HLA-DQB1P01920 OR13Z2P-201ENST00000606338 555 ntBASIC6.14□□□□□ -1.43
HLA-DQB1P01920 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC6.14□□□□□ -1.43
HLA-DQB1P01920 AL136304.1-201ENST00000607790 509 ntBASIC6.14□□□□□ -1.43
HLA-DQB1P01920 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC6.14□□□□□ -1.43
HLA-DQB1P01920 AC103974.2-201ENST00000611319 778 ntBASIC6.14□□□□□ -1.43
HLA-DQB1P01920 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.14□□□□□ -1.43
HLA-DQB1P01920 AC090373.1-201ENST00000623955 603 ntBASIC6.14□□□□□ -1.43
HLA-DQB1P01920 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC6.14□□□□□ -1.43
HLA-DQB1P01920 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC6.14□□□□□ -1.43
HLA-DQB1P01920 FAM122C-202ENST00000370785 1344 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DQB1P01920 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DQB1P01920 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DQB1P01920 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
HLA-DQB1P01920 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DQB1P01920 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DQB1P01920 AP005139.1-201ENST00000580702 1647 ntBASIC6.14□□□□□ -1.43
HLA-DQB1P01920 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DQB1P01920 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DQB1P01920 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DQB1P01920 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DQB1P01920 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DQB1P01920 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DQB1P01920 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DQB1P01920 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DQB1P01920 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DQB1P01920 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DQB1P01920 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DQB1P01920 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DQB1P01920 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DQB1P01920 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
HLA-DQB1P01920 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.13□□□□□ -1.43
HLA-DQB1P01920 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.13□□□□□ -1.43
HLA-DQB1P01920 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC6.13□□□□□ -1.43
HLA-DQB1P01920 AKR1C4-201ENST00000263126 1192 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DQB1P01920 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DQB1P01920 IL37-203ENST00000349806 589 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HLA-DQB1P01920 STAG3L4-201ENST00000352103 530 ntBASIC6.13□□□□□ -1.43
HLA-DQB1P01920 Metazoa_SRP.2-201ENST00000359385 269 ntBASIC6.13□□□□□ -1.43
HLA-DQB1P01920 OR11H13P-201ENST00000359695 979 ntBASIC6.13□□□□□ -1.43
HLA-DQB1P01920 GZMB-203ENST00000382542 666 ntTSL 2 BASIC6.13□□□□□ -1.43
HLA-DQB1P01920 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
HLA-DQB1P01920 RFKP1-201ENST00000400940 428 ntBASIC6.13□□□□□ -1.43
HLA-DQB1P01920 AL109918.1-202ENST00000406724 436 ntBASIC6.13□□□□□ -1.43
HLA-DQB1P01920 RBMY2YP-201ENST00000423333 912 ntBASIC6.13□□□□□ -1.43
HLA-DQB1P01920 SNX19-202ENST00000426933 888 ntTSL 2 BASIC6.13□□□□□ -1.43
HLA-DQB1P01920 H3F3BP1-201ENST00000440551 403 ntBASIC6.13□□□□□ -1.43
HLA-DQB1P01920 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.13□□□□□ -1.43
HLA-DQB1P01920 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC6.13□□□□□ -1.43
HLA-DQB1P01920 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.13□□□□□ -1.43
HLA-DQB1P01920 AC083841.1-201ENST00000523657 670 ntTSL 2 BASIC6.13□□□□□ -1.43
HLA-DQB1P01920 AC084337.1-201ENST00000524809 686 ntBASIC6.13□□□□□ -1.43
HLA-DQB1P01920 AC022239.1-201ENST00000527922 435 ntTSL 5 BASIC6.13□□□□□ -1.43
HLA-DQB1P01920 AP001124.1-201ENST00000529628 385 ntBASIC6.13□□□□□ -1.43
HLA-DQB1P01920 OR6M3P-201ENST00000531567 700 ntBASIC6.13□□□□□ -1.43
HLA-DQB1P01920 OR7E87P-201ENST00000532397 929 ntBASIC6.13□□□□□ -1.43
HLA-DQB1P01920 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC6.13□□□□□ -1.43
HLA-DQB1P01920 AC005479.1-201ENST00000554629 451 ntBASIC6.13□□□□□ -1.43
HLA-DQB1P01920 RBM22P13-201ENST00000569805 1244 ntBASIC6.13□□□□□ -1.43
HLA-DQB1P01920 AC009171.1-201ENST00000572673 266 ntBASIC6.13□□□□□ -1.43
HLA-DQB1P01920 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC6.13□□□□□ -1.43
HLA-DQB1P01920 AC087575.1-201ENST00000585087 229 ntBASIC6.13□□□□□ -1.43
HLA-DQB1P01920 AC005176.1-203ENST00000597077 532 ntTSL 3 BASIC6.13□□□□□ -1.43
HLA-DQB1P01920 AL356052.1-201ENST00000605764 376 ntBASIC6.13□□□□□ -1.43
HLA-DQB1P01920 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC6.13□□□□□ -1.43
HLA-DQB1P01920 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms