Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC9.38□□□□□ -0.91
ALDH1A1P00352 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC9.38□□□□□ -0.91
ALDH1A1P00352 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC9.38□□□□□ -0.91
ALDH1A1P00352 VN1R83P-201ENST00000595685 445 ntBASIC9.38□□□□□ -0.91
ALDH1A1P00352 AC133552.5-201ENST00000604266 540 ntBASIC9.38□□□□□ -0.91
ALDH1A1P00352 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC9.38□□□□□ -0.91
ALDH1A1P00352 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC9.38□□□□□ -0.91
ALDH1A1P00352 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC9.38□□□□□ -0.91
ALDH1A1P00352 IGSF1-205ENST00000370904 5413 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
ALDH1A1P00352 AL513548.3-201ENST00000611708 2865 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
ALDH1A1P00352 C4orf26-205ENST00000616557 1725 ntTSL 3 BASIC9.38□□□□□ -0.91
ALDH1A1P00352 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC9.38□□□□□ -0.91
ALDH1A1P00352 BHLHB9-202ENST00000372735 5130 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
ALDH1A1P00352 TMOD1-203ENST00000395211 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
ALDH1A1P00352 UBA1-203ENST00000377351 3466 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
ALDH1A1P00352 AC011330.1-201ENST00000510070 3235 ntBASIC9.38□□□□□ -0.91
ALDH1A1P00352 TFIP11-217ENST00000619735 3402 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
ALDH1A1P00352 FAM217B-201ENST00000358293 5152 ntAPPRIS P2 TSL 2 BASIC9.38□□□□□ -0.91
ALDH1A1P00352 AC020549.1-201ENST00000536916 1440 ntBASIC9.38□□□□□ -0.91
ALDH1A1P00352 STXBP5L-204ENST00000471454 3813 ntAPPRIS ALT1 TSL 2 BASIC9.38□□□□□ -0.91
ALDH1A1P00352 TNIK-211ENST00000475336 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
ALDH1A1P00352 UAP1-202ENST00000367924 2066 ntAPPRIS ALT1 TSL 5 BASIC9.38□□□□□ -0.91
ALDH1A1P00352 OSBPL3-202ENST00000396429 2707 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
ALDH1A1P00352 ADGRE3-202ENST00000344373 2267 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
ALDH1A1P00352 LY9-203ENST00000368037 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
ALDH1A1P00352 FREM1-203ENST00000380894 2481 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
ALDH1A1P00352 SCMH1-206ENST00000372596 3323 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
ALDH1A1P00352 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
ALDH1A1P00352 COL10A1-201ENST00000243222 3289 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
ALDH1A1P00352 ZSWIM1-202ENST00000372523 2769 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
ALDH1A1P00352 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC9.37□□□□□ -0.91
ALDH1A1P00352 CNOT4-212ENST00000541284 3563 ntAPPRIS ALT1 TSL 5 BASIC9.37□□□□□ -0.91
ALDH1A1P00352 SLU7-201ENST00000297151 3793 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
ALDH1A1P00352 AC099654.3-201ENST00000447087 1546 ntBASIC9.37□□□□□ -0.91
ALDH1A1P00352 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
ALDH1A1P00352 NFIA-208ENST00000407417 2123 ntTSL 2 BASIC9.37□□□□□ -0.91
ALDH1A1P00352 SVEP1-203ENST00000401783 12350 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
ALDH1A1P00352 EPB41-206ENST00000373798 5933 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
ALDH1A1P00352 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC9.37□□□□□ -0.91
ALDH1A1P00352 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
ALDH1A1P00352 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
ALDH1A1P00352 AC234772.1-201ENST00000377927 937 ntBASIC9.37□□□□□ -0.91
ALDH1A1P00352 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
ALDH1A1P00352 RNU4-22P-201ENST00000411058 166 ntBASIC9.37□□□□□ -0.91
ALDH1A1P00352 XIST-201ENST00000416330 750 ntTSL 2 BASIC9.37□□□□□ -0.91
ALDH1A1P00352 AC011753.4-201ENST00000417974 311 ntBASIC9.37□□□□□ -0.91
ALDH1A1P00352 AF127577.3-201ENST00000430391 781 ntTSL 2 BASIC9.37□□□□□ -0.91
ALDH1A1P00352 LINC01185-201ENST00000439412 554 ntTSL 4 BASIC9.37□□□□□ -0.91
ALDH1A1P00352 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC9.37□□□□□ -0.91
ALDH1A1P00352 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC9.37□□□□□ -0.91
ALDH1A1P00352 RBM22P5-201ENST00000449536 1277 ntBASIC9.37□□□□□ -0.91
ALDH1A1P00352 EIF3LP2-201ENST00000457262 807 ntBASIC9.37□□□□□ -0.91
ALDH1A1P00352 AC018892.2-201ENST00000457656 693 ntBASIC9.37□□□□□ -0.91
ALDH1A1P00352 RPS6P25-201ENST00000464444 748 ntBASIC9.37□□□□□ -0.91
ALDH1A1P00352 HMGN1P10-201ENST00000474557 553 ntBASIC9.37□□□□□ -0.91
ALDH1A1P00352 RN7SL205P-201ENST00000490174 284 ntBASIC9.37□□□□□ -0.91
ALDH1A1P00352 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC9.37□□□□□ -0.91
ALDH1A1P00352 CCL26-201ENST00000005180 526 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
ALDH1A1P00352 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC9.37□□□□□ -0.91
ALDH1A1P00352 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC9.37□□□□□ -0.91
ALDH1A1P00352 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC9.37□□□□□ -0.91
ALDH1A1P00352 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
ALDH1A1P00352 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC9.37□□□□□ -0.91
ALDH1A1P00352 AL049869.4-201ENST00000555669 178 ntBASIC9.37□□□□□ -0.91
ALDH1A1P00352 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC9.37□□□□□ -0.91
ALDH1A1P00352 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC9.37□□□□□ -0.91
ALDH1A1P00352 FRG2IP-201ENST00000563581 781 ntBASIC9.37□□□□□ -0.91
ALDH1A1P00352 AC127024.5-201ENST00000580085 462 ntBASIC9.37□□□□□ -0.91
ALDH1A1P00352 CBX3P2-202ENST00000583365 535 ntBASIC9.37□□□□□ -0.91
ALDH1A1P00352 RSL24D1P11-201ENST00000591045 491 ntBASIC9.37□□□□□ -0.91
ALDH1A1P00352 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
ALDH1A1P00352 AC024451.4-201ENST00000602578 752 ntBASIC9.37□□□□□ -0.91
ALDH1A1P00352 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC9.37□□□□□ -0.91
ALDH1A1P00352 AC091931.1-201ENST00000623488 728 ntBASIC9.37□□□□□ -0.91
ALDH1A1P00352 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC9.37□□□□□ -0.91
ALDH1A1P00352 MTMR2-204ENST00000409459 3420 ntTSL 5 BASIC9.37□□□□□ -0.91
ALDH1A1P00352 PPP2R1B-206ENST00000527614 5587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
ALDH1A1P00352 NDE1-201ENST00000396354 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
ALDH1A1P00352 ZNF80-203ENST00000619534 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
ALDH1A1P00352 AC002480.4-201ENST00000414116 2592 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
ALDH1A1P00352 AL049737.1-201ENST00000413920 1403 ntBASIC9.37□□□□□ -0.91
ALDH1A1P00352 TGIF2-208ENST00000611732 3344 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
ALDH1A1P00352 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
ALDH1A1P00352 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
ALDH1A1P00352 ATP8A2-201ENST00000255283 3287 ntTSL 5 BASIC9.37□□□□□ -0.91
ALDH1A1P00352 MOBP-202ENST00000383754 3051 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
ALDH1A1P00352 TRIM23-201ENST00000231524 4186 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
ALDH1A1P00352 PTK2B-201ENST00000346049 4147 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
ALDH1A1P00352 AC074198.1-201ENST00000506546 1397 ntBASIC9.37□□□□□ -0.91
ALDH1A1P00352 AC138869.3-201ENST00000563960 2486 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
ALDH1A1P00352 AC096642.1-201ENST00000612055 2614 ntBASIC9.36□□□□□ -0.91
ALDH1A1P00352 ZSCAN23-201ENST00000289788 3126 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
ALDH1A1P00352 PTGS2-201ENST00000367468 4514 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
ALDH1A1P00352 SEC16B-204ENST00000464631 2948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
ALDH1A1P00352 AC098614.1-202ENST00000634895 1830 ntBASIC9.36□□□□□ -0.91
ALDH1A1P00352 TEX11-203ENST00000374333 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
ALDH1A1P00352 AC104574.2-201ENST00000559783 1985 ntTSL 3 BASIC9.36□□□□□ -0.91
ALDH1A1P00352 OR11A1-202ENST00000377148 2482 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
ALDH1A1P00352 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
ALDH1A1P00352 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms