Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC6.83□□□□□ -1.32
SCN2BO60939 TMEM116-201ENST00000355445 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
SCN2BO60939 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC6.83□□□□□ -1.32
SCN2BO60939 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SCN2BO60939 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
SCN2BO60939 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
SCN2BO60939 TMEM75-201ENST00000624314 2165 ntBASIC6.82□□□□□ -1.32
SCN2BO60939 AC021231.1-201ENST00000559246 1342 ntTSL 5 BASIC6.82□□□□□ -1.32
SCN2BO60939 AL121949.2-201ENST00000403446 1548 ntBASIC6.82□□□□□ -1.32
SCN2BO60939 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC6.82□□□□□ -1.32
SCN2BO60939 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC6.82□□□□□ -1.32
SCN2BO60939 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.82□□□□□ -1.32
SCN2BO60939 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC6.82□□□□□ -1.32
SCN2BO60939 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SCN2BO60939 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
SCN2BO60939 RPL12P13-201ENST00000310055 497 ntBASIC6.82□□□□□ -1.32
SCN2BO60939 RN7SKP211-201ENST00000363328 315 ntBASIC6.82□□□□□ -1.32
SCN2BO60939 RN7SKP107-201ENST00000364157 290 ntBASIC6.82□□□□□ -1.32
SCN2BO60939 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SCN2BO60939 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
SCN2BO60939 HNRNPCP2-201ENST00000399515 881 ntBASIC6.82□□□□□ -1.32
SCN2BO60939 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
SCN2BO60939 RPL17P17-201ENST00000419491 557 ntBASIC6.82□□□□□ -1.32
SCN2BO60939 AL390840.1-201ENST00000420303 988 ntBASIC6.82□□□□□ -1.32
SCN2BO60939 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
SCN2BO60939 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC6.82□□□□□ -1.32
SCN2BO60939 RPL5P27-201ENST00000437011 881 ntBASIC6.82□□□□□ -1.32
SCN2BO60939 HMGN1P6-201ENST00000438508 291 ntBASIC6.82□□□□□ -1.32
SCN2BO60939 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.82□□□□□ -1.32
SCN2BO60939 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SCN2BO60939 LINC01320-202ENST00000453774 1205 ntTSL 3 BASIC6.82□□□□□ -1.32
SCN2BO60939 MIR4500HG-204ENST00000453832 827 ntTSL 3 BASIC6.82□□□□□ -1.32
SCN2BO60939 PSPC1P2-201ENST00000455130 225 ntBASIC6.82□□□□□ -1.32
SCN2BO60939 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC6.82□□□□□ -1.32
SCN2BO60939 AC131233.1-201ENST00000479200 955 ntBASIC6.82□□□□□ -1.32
SCN2BO60939 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC6.82□□□□□ -1.32
SCN2BO60939 RPL12P7-201ENST00000493832 494 ntBASIC6.82□□□□□ -1.32
SCN2BO60939 RPL5P11-201ENST00000498068 893 ntBASIC6.82□□□□□ -1.32
SCN2BO60939 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.82□□□□□ -1.32
SCN2BO60939 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SCN2BO60939 AC008967.1-201ENST00000504843 163 ntBASIC6.82□□□□□ -1.32
SCN2BO60939 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC6.82□□□□□ -1.32
SCN2BO60939 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC6.82□□□□□ -1.32
SCN2BO60939 AC132192.1-201ENST00000531111 597 ntTSL 3 BASIC6.82□□□□□ -1.32
SCN2BO60939 AC053513.1-201ENST00000543604 738 ntTSL 3 BASIC6.82□□□□□ -1.32
SCN2BO60939 DAZAP2-208ENST00000549555 872 ntTSL 2 BASIC6.82□□□□□ -1.32
SCN2BO60939 AP003071.2-201ENST00000562772 990 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SCN2BO60939 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC6.82□□□□□ -1.32
SCN2BO60939 OR7E94P-202ENST00000601375 790 ntBASIC6.82□□□□□ -1.32
SCN2BO60939 AL583859.2-202ENST00000602311 505 ntTSL 5 BASIC6.82□□□□□ -1.32
SCN2BO60939 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC6.82□□□□□ -1.32
SCN2BO60939 AP002345.2-201ENST00000609961 904 ntBASIC6.82□□□□□ -1.32
SCN2BO60939 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SCN2BO60939 AC243830.3-201ENST00000616810 376 ntBASIC6.82□□□□□ -1.32
SCN2BO60939 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC6.82□□□□□ -1.32
SCN2BO60939 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC6.82□□□□□ -1.32
SCN2BO60939 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
SCN2BO60939 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SCN2BO60939 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
SCN2BO60939 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
SCN2BO60939 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SCN2BO60939 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
SCN2BO60939 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SCN2BO60939 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
SCN2BO60939 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
SCN2BO60939 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
SCN2BO60939 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.82□□□□□ -1.32
SCN2BO60939 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC6.82□□□□□ -1.32
SCN2BO60939 AL031651.1-201ENST00000615357 1438 ntBASIC6.82□□□□□ -1.32
SCN2BO60939 MPEG1-201ENST00000361050 4442 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
SCN2BO60939 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
SCN2BO60939 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
SCN2BO60939 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SCN2BO60939 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SCN2BO60939 AL136298.2-201ENST00000556497 1570 ntBASIC6.82□□□□□ -1.32
SCN2BO60939 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
SCN2BO60939 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SCN2BO60939 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.82□□□□□ -1.32
SCN2BO60939 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC6.81□□□□□ -1.32
SCN2BO60939 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
SCN2BO60939 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC6.81□□□□□ -1.32
SCN2BO60939 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SCN2BO60939 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
SCN2BO60939 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC6.81□□□□□ -1.32
SCN2BO60939 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SCN2BO60939 AC091544.5-201ENST00000620192 3815 ntBASIC6.81□□□□□ -1.32
SCN2BO60939 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SCN2BO60939 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SCN2BO60939 AL606490.2-201ENST00000457562 1330 ntBASIC6.81□□□□□ -1.32
SCN2BO60939 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.81□□□□□ -1.32
SCN2BO60939 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC6.81□□□□□ -1.32
SCN2BO60939 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
SCN2BO60939 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
SCN2BO60939 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SCN2BO60939 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
SCN2BO60939 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
SCN2BO60939 RPL7-203ENST00000396466 762 ntTSL 3 BASIC6.81□□□□□ -1.32
SCN2BO60939 AC009237.9-201ENST00000414800 347 ntBASIC6.81□□□□□ -1.32
SCN2BO60939 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.81□□□□□ -1.32
SCN2BO60939 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms