Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
SNX18Q96RF0 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
SNX18Q96RF0 HSPA8P11-201ENST00000508840 1898 ntBASIC6.83□□□□□ -1.32
SNX18Q96RF0 CXCR2P1-201ENST00000439871 2503 ntTSL 3 BASIC6.83□□□□□ -1.32
SNX18Q96RF0 KLRB1-201ENST00000229402 1448 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SNX18Q96RF0 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.83□□□□□ -1.32
SNX18Q96RF0 PROM1-210ENST00000510224 4006 ntAPPRIS P3 TSL 5 BASIC6.83□□□□□ -1.32
SNX18Q96RF0 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SNX18Q96RF0 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.83□□□□□ -1.32
SNX18Q96RF0 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
SNX18Q96RF0 FCGR2A-202ENST00000367972 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
SNX18Q96RF0 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
SNX18Q96RF0 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SNX18Q96RF0 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC6.82□□□□□ -1.32
SNX18Q96RF0 AC018688.1-201ENST00000636528 1754 ntBASIC6.82□□□□□ -1.32
SNX18Q96RF0 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SNX18Q96RF0 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SNX18Q96RF0 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC6.82□□□□□ -1.32
SNX18Q96RF0 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SNX18Q96RF0 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC6.82□□□□□ -1.32
SNX18Q96RF0 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SNX18Q96RF0 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SNX18Q96RF0 AL390760.1-201ENST00000366188 410 ntTSL 5 BASIC6.82□□□□□ -1.32
SNX18Q96RF0 SNORA68-201ENST00000384437 133 ntBASIC6.82□□□□□ -1.32
SNX18Q96RF0 MIR128-2-201ENST00000384893 84 ntBASIC6.82□□□□□ -1.32
SNX18Q96RF0 SEC61G-202ENST00000395535 459 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
SNX18Q96RF0 RPL5P35-201ENST00000398869 816 ntBASIC6.82□□□□□ -1.32
SNX18Q96RF0 AC017035.1-201ENST00000411999 1115 ntBASIC6.82□□□□□ -1.32
SNX18Q96RF0 BCRP8-201ENST00000412037 255 ntBASIC6.82□□□□□ -1.32
SNX18Q96RF0 LINC01715-201ENST00000420776 624 ntTSL 2 BASIC6.82□□□□□ -1.32
SNX18Q96RF0 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC6.82□□□□□ -1.32
SNX18Q96RF0 GAPDHP51-201ENST00000426454 1000 ntBASIC6.82□□□□□ -1.32
SNX18Q96RF0 AF127577.3-201ENST00000430391 781 ntTSL 2 BASIC6.82□□□□□ -1.32
SNX18Q96RF0 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.82□□□□□ -1.32
SNX18Q96RF0 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC6.82□□□□□ -1.32
SNX18Q96RF0 AL359502.1-201ENST00000437334 692 ntTSL 3 BASIC6.82□□□□□ -1.32
SNX18Q96RF0 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.82□□□□□ -1.32
SNX18Q96RF0 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC6.82□□□□□ -1.32
SNX18Q96RF0 LINC02474-202ENST00000441160 1148 ntTSL 5 BASIC6.82□□□□□ -1.32
SNX18Q96RF0 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.82□□□□□ -1.32
SNX18Q96RF0 AC239860.1-201ENST00000444680 1270 ntBASIC6.82□□□□□ -1.32
SNX18Q96RF0 AC093157.1-205ENST00000449473 1298 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SNX18Q96RF0 AC092570.2-201ENST00000452117 1143 ntBASIC6.82□□□□□ -1.32
SNX18Q96RF0 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC6.82□□□□□ -1.32
SNX18Q96RF0 IGKV1OR22-5-201ENST00000458718 354 ntBASIC6.82□□□□□ -1.32
SNX18Q96RF0 AL035660.2-201ENST00000461248 556 ntTSL 2 BASIC6.82□□□□□ -1.32
SNX18Q96RF0 AGGF1P3-201ENST00000493675 1213 ntBASIC6.82□□□□□ -1.32
SNX18Q96RF0 RPL37AP8-201ENST00000494116 276 ntBASIC6.82□□□□□ -1.32
SNX18Q96RF0 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC6.82□□□□□ -1.32
SNX18Q96RF0 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC6.82□□□□□ -1.32
SNX18Q96RF0 AC090568.2-203ENST00000521433 579 ntTSL 4 BASIC6.82□□□□□ -1.32
SNX18Q96RF0 OSTCP1-202ENST00000522287 1195 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SNX18Q96RF0 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC6.82□□□□□ -1.32
SNX18Q96RF0 AP003721.2-201ENST00000536495 452 ntTSL 3 BASIC6.82□□□□□ -1.32
SNX18Q96RF0 AC244131.1-201ENST00000542152 922 ntBASIC6.82□□□□□ -1.32
SNX18Q96RF0 NDFIP1P1-201ENST00000543144 525 ntBASIC6.82□□□□□ -1.32
SNX18Q96RF0 VDAC2P2-201ENST00000544463 901 ntBASIC6.82□□□□□ -1.32
SNX18Q96RF0 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC6.82□□□□□ -1.32
SNX18Q96RF0 AC026111.1-201ENST00000551090 1195 ntBASIC6.82□□□□□ -1.32
SNX18Q96RF0 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SNX18Q96RF0 RN7SL376P-201ENST00000578594 264 ntBASIC6.82□□□□□ -1.32
SNX18Q96RF0 RBM4-213ENST00000578778 582 ntTSL 4 BASIC6.82□□□□□ -1.32
SNX18Q96RF0 AC099777.1-201ENST00000603779 1070 ntBASIC6.82□□□□□ -1.32
SNX18Q96RF0 AP000436.1-201ENST00000605239 800 ntBASIC6.82□□□□□ -1.32
SNX18Q96RF0 PFN1P2-202ENST00000621347 397 ntBASIC6.82□□□□□ -1.32
SNX18Q96RF0 NR1I3-235ENST00000628566 1201 ntTSL 5 BASIC6.82□□□□□ -1.32
SNX18Q96RF0 AC073488.8-201ENST00000631952 757 ntBASIC6.82□□□□□ -1.32
SNX18Q96RF0 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.82□□□□□ -1.32
SNX18Q96RF0 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC6.82□□□□□ -1.32
SNX18Q96RF0 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
SNX18Q96RF0 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC6.82□□□□□ -1.32
SNX18Q96RF0 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SNX18Q96RF0 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.82□□□□□ -1.32
SNX18Q96RF0 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SNX18Q96RF0 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
SNX18Q96RF0 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
SNX18Q96RF0 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SNX18Q96RF0 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SNX18Q96RF0 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC6.82□□□□□ -1.32
SNX18Q96RF0 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SNX18Q96RF0 AC083899.2-201ENST00000423285 1376 ntBASIC6.82□□□□□ -1.32
SNX18Q96RF0 MAPK10-270ENST00000641102 3538 ntBASIC6.81□□□□□ -1.32
SNX18Q96RF0 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SNX18Q96RF0 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SNX18Q96RF0 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.81□□□□□ -1.32
SNX18Q96RF0 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SNX18Q96RF0 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
SNX18Q96RF0 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
SNX18Q96RF0 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
SNX18Q96RF0 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC6.81□□□□□ -1.32
SNX18Q96RF0 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC6.81□□□□□ -1.32
SNX18Q96RF0 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SNX18Q96RF0 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
SNX18Q96RF0 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.81□□□□□ -1.32
SNX18Q96RF0 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.81□□□□□ -1.32
SNX18Q96RF0 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
SNX18Q96RF0 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC6.81□□□□□ -1.32
SNX18Q96RF0 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
SNX18Q96RF0 DYNLRB1-202ENST00000357156 675 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SNX18Q96RF0 RNA5SP427-201ENST00000365323 119 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms