Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
COL15A1P39059 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
COL15A1P39059 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
COL15A1P39059 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
COL15A1P39059 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
COL15A1P39059 CHRDL1-201ENST00000372042 1934 ntAPPRIS ALT1 TSL 2 BASIC9.07□□□□□ -0.96
COL15A1P39059 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
COL15A1P39059 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
COL15A1P39059 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
COL15A1P39059 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
COL15A1P39059 MIR621-201ENST00000384919 96 ntBASIC9.07□□□□□ -0.96
COL15A1P39059 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC9.07□□□□□ -0.96
COL15A1P39059 IGLVVII-41-1-201ENST00000518405 151 ntBASIC9.07□□□□□ -0.96
COL15A1P39059 RGS5-220ENST00000528689 566 ntTSL 5 BASIC9.07□□□□□ -0.96
COL15A1P39059 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC9.07□□□□□ -0.96
COL15A1P39059 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC9.07□□□□□ -0.96
COL15A1P39059 ADAM3B-201ENST00000569937 840 ntBASIC9.07□□□□□ -0.96
COL15A1P39059 EIF4A3P1-201ENST00000578499 647 ntBASIC9.07□□□□□ -0.96
COL15A1P39059 AC023513.1-201ENST00000604396 691 ntBASIC9.07□□□□□ -0.96
COL15A1P39059 AL359091.2-201ENST00000609303 556 ntBASIC9.07□□□□□ -0.96
COL15A1P39059 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC9.07□□□□□ -0.96
COL15A1P39059 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC9.07□□□□□ -0.96
COL15A1P39059 AC023818.2-201ENST00000623817 2304 ntBASIC9.07□□□□□ -0.96
COL15A1P39059 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC9.06□□□□□ -0.96
COL15A1P39059 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC9.06□□□□□ -0.96
COL15A1P39059 Z99129.4-201ENST00000624649 2435 ntBASIC9.06□□□□□ -0.96
COL15A1P39059 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC9.06□□□□□ -0.96
COL15A1P39059 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
COL15A1P39059 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
COL15A1P39059 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
COL15A1P39059 RNA5SP152-201ENST00000365184 110 ntBASIC9.06□□□□□ -0.96
COL15A1P39059 RN7SKP254-201ENST00000410685 310 ntBASIC9.06□□□□□ -0.96
COL15A1P39059 RN7SKP38-201ENST00000410782 309 ntBASIC9.06□□□□□ -0.96
COL15A1P39059 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC9.06□□□□□ -0.96
COL15A1P39059 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC9.06□□□□□ -0.96
COL15A1P39059 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
COL15A1P39059 RN7SL492P-201ENST00000460700 295 ntBASIC9.06□□□□□ -0.96
COL15A1P39059 RN7SL83P-201ENST00000468131 297 ntBASIC9.06□□□□□ -0.96
COL15A1P39059 MARK2P8-201ENST00000476069 952 ntBASIC9.06□□□□□ -0.96
COL15A1P39059 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC9.06□□□□□ -0.96
COL15A1P39059 RNA5SP473-201ENST00000516402 125 ntBASIC9.06□□□□□ -0.96
COL15A1P39059 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC9.06□□□□□ -0.96
COL15A1P39059 AC021820.1-201ENST00000525564 808 ntBASIC9.06□□□□□ -0.96
COL15A1P39059 SAA3P-201ENST00000533267 365 ntBASIC9.06□□□□□ -0.96
COL15A1P39059 ACER3-213ENST00000533873 929 ntTSL 2 BASIC9.06□□□□□ -0.96
COL15A1P39059 AC092130.1-201ENST00000565531 531 ntTSL 4 BASIC9.06□□□□□ -0.96
COL15A1P39059 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC9.06□□□□□ -0.96
COL15A1P39059 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC9.06□□□□□ -0.96
COL15A1P39059 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC9.06□□□□□ -0.96
COL15A1P39059 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC9.06□□□□□ -0.96
COL15A1P39059 MRPL57P3-201ENST00000619218 176 ntBASIC9.06□□□□□ -0.96
COL15A1P39059 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC9.06□□□□□ -0.96
COL15A1P39059 TEX41-293ENST00000630451 690 ntTSL 5 BASIC9.06□□□□□ -0.96
COL15A1P39059 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
COL15A1P39059 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
COL15A1P39059 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC9.06□□□□□ -0.96
COL15A1P39059 BTK-210ENST00000621635 2767 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
COL15A1P39059 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC9.06□□□□□ -0.96
COL15A1P39059 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
COL15A1P39059 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC9.06□□□□□ -0.96
COL15A1P39059 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC9.06□□□□□ -0.96
COL15A1P39059 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
COL15A1P39059 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
COL15A1P39059 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC9.06□□□□□ -0.96
COL15A1P39059 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC9.06□□□□□ -0.96
COL15A1P39059 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
COL15A1P39059 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
COL15A1P39059 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
COL15A1P39059 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC9.05□□□□□ -0.96
COL15A1P39059 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC9.05□□□□□ -0.96
COL15A1P39059 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
COL15A1P39059 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
COL15A1P39059 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
COL15A1P39059 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
COL15A1P39059 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
COL15A1P39059 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
COL15A1P39059 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
COL15A1P39059 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
COL15A1P39059 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
COL15A1P39059 RNA5SP382-201ENST00000363355 112 ntBASIC9.05□□□□□ -0.96
COL15A1P39059 RN7SKP107-201ENST00000364157 290 ntBASIC9.05□□□□□ -0.96
COL15A1P39059 GEMIN2P2-201ENST00000418195 715 ntBASIC9.05□□□□□ -0.96
COL15A1P39059 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC9.05□□□□□ -0.96
COL15A1P39059 RN7SL70P-201ENST00000478322 302 ntBASIC9.05□□□□□ -0.96
COL15A1P39059 RPL23AP8-201ENST00000479812 475 ntBASIC9.05□□□□□ -0.96
COL15A1P39059 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
COL15A1P39059 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC9.05□□□□□ -0.96
COL15A1P39059 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC9.05□□□□□ -0.96
COL15A1P39059 IGHVIII-26-1-201ENST00000520387 250 ntBASIC9.05□□□□□ -0.96
COL15A1P39059 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC9.05□□□□□ -0.96
COL15A1P39059 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC9.05□□□□□ -0.96
COL15A1P39059 Six3os1_2.1-201ENST00000616963 217 ntBASIC9.05□□□□□ -0.96
COL15A1P39059 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
COL15A1P39059 MKI67P1-201ENST00000604297 1460 ntBASIC9.05□□□□□ -0.96
COL15A1P39059 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
COL15A1P39059 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
COL15A1P39059 ADGRE3-201ENST00000253673 2254 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
COL15A1P39059 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC9.05□□□□□ -0.96
COL15A1P39059 AC090181.3-201ENST00000624777 1514 ntBASIC9.05□□□□□ -0.96
COL15A1P39059 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms