Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 OR9K2-204ENST00000641374 1122 ntAPPRIS P1 BASIC9□□□□□ -0.97
ERCC3P19447 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC9□□□□□ -0.97
ERCC3P19447 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC9□□□□□ -0.97
ERCC3P19447 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC9□□□□□ -0.97
ERCC3P19447 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC9□□□□□ -0.97
ERCC3P19447 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
ERCC3P19447 SLC22A10-201ENST00000332793 2026 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
ERCC3P19447 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
ERCC3P19447 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
ERCC3P19447 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
ERCC3P19447 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
ERCC3P19447 RPS17-209ENST00000561157 1909 ntTSL 2 BASIC8.99□□□□□ -0.97
ERCC3P19447 GART-201ENST00000361093 2149 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
ERCC3P19447 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
ERCC3P19447 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
ERCC3P19447 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
ERCC3P19447 SAP18-207ENST00000607003 2234 ntAPPRIS ALT1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ERCC3P19447 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ERCC3P19447 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
ERCC3P19447 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC8.99□□□□□ -0.97
ERCC3P19447 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ERCC3P19447 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
ERCC3P19447 PTER-203ENST00000423462 3212 ntTSL 3 BASIC8.99□□□□□ -0.97
ERCC3P19447 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC8.99□□□□□ -0.97
ERCC3P19447 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
ERCC3P19447 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
ERCC3P19447 RNA5SP185-201ENST00000390963 114 ntBASIC8.99□□□□□ -0.97
ERCC3P19447 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC8.99□□□□□ -0.97
ERCC3P19447 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
ERCC3P19447 LINC01066-201ENST00000415283 399 ntTSL 3 BASIC8.99□□□□□ -0.97
ERCC3P19447 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC8.99□□□□□ -0.97
ERCC3P19447 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC8.99□□□□□ -0.97
ERCC3P19447 AL354732.1-204ENST00000421020 755 ntTSL 3 BASIC8.99□□□□□ -0.97
ERCC3P19447 AC009303.1-201ENST00000426307 352 ntBASIC8.99□□□□□ -0.97
ERCC3P19447 AL138479.1-201ENST00000426913 484 ntBASIC8.99□□□□□ -0.97
ERCC3P19447 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC8.99□□□□□ -0.97
ERCC3P19447 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
ERCC3P19447 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC8.99□□□□□ -0.97
ERCC3P19447 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC8.99□□□□□ -0.97
ERCC3P19447 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
ERCC3P19447 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
ERCC3P19447 AC135999.1-201ENST00000478962 479 ntBASIC8.99□□□□□ -0.97
ERCC3P19447 MRPL49P1-201ENST00000505951 535 ntBASIC8.99□□□□□ -0.97
ERCC3P19447 AC114322.1-201ENST00000506771 926 ntBASIC8.99□□□□□ -0.97
ERCC3P19447 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC8.99□□□□□ -0.97
ERCC3P19447 IGKV3-34-201ENST00000521692 293 ntBASIC8.99□□□□□ -0.97
ERCC3P19447 AC008708.2-201ENST00000522956 1124 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
ERCC3P19447 UBTFL9-201ENST00000534504 1148 ntBASIC8.99□□□□□ -0.97
ERCC3P19447 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC8.99□□□□□ -0.97
ERCC3P19447 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
ERCC3P19447 AC233266.2-201ENST00000567067 528 ntBASIC8.99□□□□□ -0.97
ERCC3P19447 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
ERCC3P19447 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC8.99□□□□□ -0.97
ERCC3P19447 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC8.99□□□□□ -0.97
ERCC3P19447 AC005242.1-201ENST00000585658 438 ntBASIC8.99□□□□□ -0.97
ERCC3P19447 AC024451.4-201ENST00000602578 752 ntBASIC8.99□□□□□ -0.97
ERCC3P19447 AC140658.6-201ENST00000603958 201 ntBASIC8.99□□□□□ -0.97
ERCC3P19447 AL353807.4-201ENST00000604995 257 ntBASIC8.99□□□□□ -0.97
ERCC3P19447 ZNF365-211ENST00000614806 877 ntTSL 5 BASIC8.99□□□□□ -0.97
ERCC3P19447 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC8.99□□□□□ -0.97
ERCC3P19447 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC8.99□□□□□ -0.97
ERCC3P19447 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC8.99□□□□□ -0.97
ERCC3P19447 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC8.99□□□□□ -0.97
ERCC3P19447 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ERCC3P19447 AC110998.1-201ENST00000519029 2053 ntBASIC8.99□□□□□ -0.97
ERCC3P19447 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC8.99□□□□□ -0.97
ERCC3P19447 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
ERCC3P19447 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
ERCC3P19447 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC8.99□□□□□ -0.97
ERCC3P19447 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
ERCC3P19447 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ERCC3P19447 TMPRSS11D-201ENST00000283916 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ERCC3P19447 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC8.99□□□□□ -0.97
ERCC3P19447 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ERCC3P19447 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
ERCC3P19447 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
ERCC3P19447 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
ERCC3P19447 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
ERCC3P19447 CYP2C19-202ENST00000480405 1417 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
ERCC3P19447 NF1P2-201ENST00000556855 2505 ntBASIC8.98□□□□□ -0.97
ERCC3P19447 MAPK10-371ENST00000641952 5209 ntBASIC8.98□□□□□ -0.97
ERCC3P19447 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
ERCC3P19447 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
ERCC3P19447 AMYH02020865.1-201ENST00000621140 2591 ntTSL 2 BASIC8.98□□□□□ -0.97
ERCC3P19447 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
ERCC3P19447 GABRP-203ENST00000518525 3576 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
ERCC3P19447 PHF6-203ENST00000370800 1150 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
ERCC3P19447 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC8.98□□□□□ -0.97
ERCC3P19447 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC8.98□□□□□ -0.97
ERCC3P19447 EIF4A1P10-201ENST00000428832 1216 ntBASIC8.98□□□□□ -0.97
ERCC3P19447 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC8.98□□□□□ -0.97
ERCC3P19447 AL512637.2-201ENST00000431287 1256 ntBASIC8.98□□□□□ -0.97
ERCC3P19447 GAPDHP75-201ENST00000433910 943 ntBASIC8.98□□□□□ -0.97
ERCC3P19447 AL512882.1-201ENST00000436086 832 ntBASIC8.98□□□□□ -0.97
ERCC3P19447 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC8.98□□□□□ -0.97
ERCC3P19447 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC8.98□□□□□ -0.97
ERCC3P19447 OR52I1-201ENST00000450052 1050 ntBASIC8.98□□□□□ -0.97
ERCC3P19447 MTND2P6-201ENST00000455337 1030 ntBASIC8.98□□□□□ -0.97
ERCC3P19447 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC8.98□□□□□ -0.97
ERCC3P19447 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC8.98□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms