Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC7.83□□□□□ -1.16
NID1P14543 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC7.83□□□□□ -1.16
NID1P14543 XIST-201ENST00000416330 750 ntTSL 2 BASIC7.83□□□□□ -1.16
NID1P14543 CNOT4P1-201ENST00000417432 1199 ntBASIC7.83□□□□□ -1.16
NID1P14543 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC7.83□□□□□ -1.16
NID1P14543 AL121990.1-201ENST00000417605 591 ntTSL 3 BASIC7.83□□□□□ -1.16
NID1P14543 AP001116.1-201ENST00000421604 762 ntTSL 3 BASIC7.83□□□□□ -1.16
NID1P14543 WRBP1-201ENST00000423352 334 ntBASIC7.83□□□□□ -1.16
NID1P14543 AL049610.1-201ENST00000423374 372 ntBASIC7.83□□□□□ -1.16
NID1P14543 SOX9-AS1-203ENST00000424417 576 ntTSL 4 BASIC7.83□□□□□ -1.16
NID1P14543 CENPIP1-201ENST00000425713 902 ntBASIC7.83□□□□□ -1.16
NID1P14543 RPS26P4-201ENST00000431743 355 ntBASIC7.83□□□□□ -1.16
NID1P14543 USP9YP35-201ENST00000435696 412 ntBASIC7.83□□□□□ -1.16
NID1P14543 AC242426.2-201ENST00000446956 795 ntBASIC7.83□□□□□ -1.16
NID1P14543 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC7.83□□□□□ -1.16
NID1P14543 PAX8-AS1-208ENST00000456685 1207 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NID1P14543 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC7.83□□□□□ -1.16
NID1P14543 AC018638.4-201ENST00000465971 1150 ntBASIC7.83□□□□□ -1.16
NID1P14543 RN7SL263P-201ENST00000467969 290 ntBASIC7.83□□□□□ -1.16
NID1P14543 NUTF2P5-201ENST00000475013 379 ntBASIC7.83□□□□□ -1.16
NID1P14543 RPS3P7-201ENST00000488662 726 ntBASIC7.83□□□□□ -1.16
NID1P14543 OR4G11P-201ENST00000492842 939 ntBASIC7.83□□□□□ -1.16
NID1P14543 AC092045.1-201ENST00000495716 1231 ntBASIC7.83□□□□□ -1.16
NID1P14543 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC7.83□□□□□ -1.16
NID1P14543 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC7.83□□□□□ -1.16
NID1P14543 MTCO1P31-201ENST00000506355 492 ntBASIC7.83□□□□□ -1.16
NID1P14543 AC010307.4-202ENST00000507403 389 ntTSL 3 BASIC7.83□□□□□ -1.16
NID1P14543 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC7.83□□□□□ -1.16
NID1P14543 AC139713.1-202ENST00000512366 460 ntBASIC7.83□□□□□ -1.16
NID1P14543 AC114781.4-201ENST00000513707 639 ntBASIC7.83□□□□□ -1.16
NID1P14543 AC022447.1-201ENST00000515358 464 ntBASIC7.83□□□□□ -1.16
NID1P14543 AC109588.1-202ENST00000515720 880 ntTSL 3 BASIC7.83□□□□□ -1.16
NID1P14543 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC7.83□□□□□ -1.16
NID1P14543 AP002469.1-201ENST00000526011 1043 ntBASIC7.83□□□□□ -1.16
NID1P14543 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC7.83□□□□□ -1.16
NID1P14543 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC7.83□□□□□ -1.16
NID1P14543 AL121579.1-201ENST00000555129 305 ntBASIC7.83□□□□□ -1.16
NID1P14543 OR4N3P-201ENST00000559395 818 ntBASIC7.83□□□□□ -1.16
NID1P14543 AC140658.1-201ENST00000563019 346 ntTSL 5 BASIC7.83□□□□□ -1.16
NID1P14543 ULK4P3-201ENST00000563895 440 ntBASIC7.83□□□□□ -1.16
NID1P14543 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC7.83□□□□□ -1.16
NID1P14543 RPL17-212ENST00000581373 584 ntTSL 2 BASIC7.83□□□□□ -1.16
NID1P14543 ZNF880-206ENST00000600321 953 ntTSL 2 BASIC7.83□□□□□ -1.16
NID1P14543 Metazoa_SRP.71-201ENST00000612122 282 ntBASIC7.83□□□□□ -1.16
NID1P14543 AC092794.2-201ENST00000620933 563 ntBASIC7.83□□□□□ -1.16
NID1P14543 AC135068.4-201ENST00000622949 925 ntBASIC7.83□□□□□ -1.16
NID1P14543 AC009120.7-201ENST00000623452 780 ntBASIC7.83□□□□□ -1.16
NID1P14543 AC016542.3-201ENST00000623520 619 ntBASIC7.83□□□□□ -1.16
NID1P14543 AC027176.3-201ENST00000624460 586 ntBASIC7.83□□□□□ -1.16
NID1P14543 AC087645.3-201ENST00000624708 587 ntBASIC7.83□□□□□ -1.16
NID1P14543 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC7.83□□□□□ -1.16
NID1P14543 LIMCH1-209ENST00000509277 3474 ntTSL 2 BASIC7.83□□□□□ -1.16
NID1P14543 TRIM55-204ENST00000353317 2624 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NID1P14543 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NID1P14543 TRHR-201ENST00000311762 1415 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NID1P14543 DAZ4-203ENST00000382432 2405 ntTSL 5 BASIC7.83□□□□□ -1.16
NID1P14543 DAZ2-205ENST00000382433 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
NID1P14543 NCEH1-206ENST00000543711 4062 ntTSL 2 BASIC7.83□□□□□ -1.16
NID1P14543 PTBP2-201ENST00000370197 3057 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NID1P14543 RECQL-203ENST00000421138 2572 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NID1P14543 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
NID1P14543 AC016582.1-201ENST00000592640 1716 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NID1P14543 CTNNA1-210ENST00000518825 3536 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NID1P14543 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NID1P14543 MAPK8-201ENST00000360332 5438 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NID1P14543 SELENON-205ENST00000630065 2994 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NID1P14543 ZNF317-201ENST00000247956 4073 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
NID1P14543 TTLL9-206ENST00000535842 3261 ntAPPRIS P2 TSL 5 BASIC7.83□□□□□ -1.16
NID1P14543 AP4S1-204ENST00000542754 4243 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NID1P14543 C2orf91-201ENST00000378711 3721 ntAPPRIS P2 TSL 2 BASIC7.82□□□□□ -1.16
NID1P14543 AL049833.3-201ENST00000623920 3738 ntBASIC7.82□□□□□ -1.16
NID1P14543 SLC17A2-202ENST00000360488 2270 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
NID1P14543 FBXW7-207ENST00000603841 2261 ntAPPRIS P4 TSL 1 (best) BASIC7.82□□□□□ -1.16
NID1P14543 GSTM4-203ENST00000369833 3990 ntTSL 5 BASIC7.82□□□□□ -1.16
NID1P14543 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC7.82□□□□□ -1.16
NID1P14543 HHLA2-205ENST00000467562 1457 ntTSL 2 BASIC7.82□□□□□ -1.16
NID1P14543 AC009044.1-201ENST00000624577 1798 ntBASIC7.82□□□□□ -1.16
NID1P14543 MPI-213ENST00000566377 2809 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NID1P14543 TMEM144-201ENST00000296529 3442 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NID1P14543 GRIK2-207ENST00000421544 4789 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NID1P14543 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
NID1P14543 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NID1P14543 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NID1P14543 SUGT1P3-201ENST00000304932 1051 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NID1P14543 PRYP4-201ENST00000306589 444 ntBASIC7.82□□□□□ -1.16
NID1P14543 SMIM7-201ENST00000358726 850 ntTSL 2 BASIC7.82□□□□□ -1.16
NID1P14543 AL050335.1-201ENST00000396909 869 ntBASIC7.82□□□□□ -1.16
NID1P14543 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NID1P14543 MAGEC3-202ENST00000409007 1290 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
NID1P14543 RN7SKP127-201ENST00000410443 354 ntBASIC7.82□□□□□ -1.16
NID1P14543 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NID1P14543 OR13D3P-201ENST00000412501 937 ntBASIC7.82□□□□□ -1.16
NID1P14543 AL138828.1-207ENST00000417643 734 ntTSL 5 BASIC7.82□□□□□ -1.16
NID1P14543 NPM1P26-201ENST00000426339 738 ntBASIC7.82□□□□□ -1.16
NID1P14543 DEFB130D-201ENST00000426866 237 ntBASIC7.82□□□□□ -1.16
NID1P14543 AC244034.1-201ENST00000428027 792 ntBASIC7.82□□□□□ -1.16
NID1P14543 MTND1P2-201ENST00000430604 821 ntBASIC7.82□□□□□ -1.16
NID1P14543 MTCO1P43-201ENST00000431831 488 ntBASIC7.82□□□□□ -1.16
NID1P14543 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC7.82□□□□□ -1.16
NID1P14543 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms